Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 AC026979.3-201ENST00000607315 403 ntBASIC19.23■□□□□ 0.67
CTR9Q6PD62 AL844908.2-201ENST00000609461 460 ntBASIC19.23■□□□□ 0.67
CTR9Q6PD62 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 AC087499.5-201ENST00000452760 1342 ntBASIC19.23■□□□□ 0.67
CTR9Q6PD62 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTR9Q6PD62 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTR9Q6PD62 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.22■□□□□ 0.67
CTR9Q6PD62 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CTR9Q6PD62 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CTR9Q6PD62 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTR9Q6PD62 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTR9Q6PD62 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTR9Q6PD62 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTR9Q6PD62 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.22■□□□□ 0.67
CTR9Q6PD62 TSPY16P-201ENST00000449843 468 ntBASIC19.22■□□□□ 0.67
CTR9Q6PD62 AC009477.1-201ENST00000452936 217 ntBASIC19.22■□□□□ 0.67
CTR9Q6PD62 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.22■□□□□ 0.67
CTR9Q6PD62 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.22■□□□□ 0.67
CTR9Q6PD62 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.22■□□□□ 0.67
CTR9Q6PD62 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTR9Q6PD62 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.22■□□□□ 0.67
CTR9Q6PD62 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.22■□□□□ 0.67
CTR9Q6PD62 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.22■□□□□ 0.67
CTR9Q6PD62 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.22■□□□□ 0.67
CTR9Q6PD62 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.22■□□□□ 0.67
CTR9Q6PD62 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTR9Q6PD62 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTR9Q6PD62 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 KRT8P12-202ENST00000472924 1397 ntBASIC19.21■□□□□ 0.67
CTR9Q6PD62 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 AC009407.1-201ENST00000568958 598 ntBASIC19.21■□□□□ 0.67
CTR9Q6PD62 RN7SL204P-201ENST00000582831 262 ntBASIC19.21■□□□□ 0.67
CTR9Q6PD62 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 AL118508.1-201ENST00000613502 2345 ntBASIC19.21■□□□□ 0.67
CTR9Q6PD62 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 AC092364.2-201ENST00000596710 2692 ntBASIC19.21■□□□□ 0.67
CTR9Q6PD62 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTR9Q6PD62 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.21■□□□□ 0.67
CTR9Q6PD62 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTR9Q6PD62 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTR9Q6PD62 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTR9Q6PD62 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.2■□□□□ 0.66
CTR9Q6PD62 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.2■□□□□ 0.66
CTR9Q6PD62 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.2■□□□□ 0.66
CTR9Q6PD62 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CTR9Q6PD62 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTR9Q6PD62 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTR9Q6PD62 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTR9Q6PD62 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CTR9Q6PD62 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTR9Q6PD62 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTR9Q6PD62 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms