Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
SSX1Q16384 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 AC007686.3-201ENST00000619017 3487 ntBASIC14.42□□□□□ -0.1
SSX1Q16384 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SSX1Q16384 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SSX1Q16384 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.41□□□□□ -0.1
SSX1Q16384 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SSX1Q16384 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SSX1Q16384 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.41□□□□□ -0.1
SSX1Q16384 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
SSX1Q16384 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.41□□□□□ -0.1
SSX1Q16384 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SSX1Q16384 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.41□□□□□ -0.1
SSX1Q16384 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SSX1Q16384 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.41□□□□□ -0.1
SSX1Q16384 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.41□□□□□ -0.1
SSX1Q16384 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.41□□□□□ -0.1
SSX1Q16384 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SSX1Q16384 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 BX005266.1-201ENST00000473402 457 ntBASIC14.41□□□□□ -0.1
SSX1Q16384 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.41□□□□□ -0.1
SSX1Q16384 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.41□□□□□ -0.1
SSX1Q16384 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.41□□□□□ -0.1
SSX1Q16384 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SSX1Q16384 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
SSX1Q16384 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
SSX1Q16384 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.41□□□□□ -0.1
SSX1Q16384 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.41□□□□□ -0.1
SSX1Q16384 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SSX1Q16384 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSX1Q16384 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.41□□□□□ -0.1
SSX1Q16384 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SSX1Q16384 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SSX1Q16384 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.4□□□□□ -0.1
SSX1Q16384 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.4□□□□□ -0.1
SSX1Q16384 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.4□□□□□ -0.1
SSX1Q16384 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SSX1Q16384 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SSX1Q16384 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SSX1Q16384 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.4□□□□□ -0.1
SSX1Q16384 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SSX1Q16384 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.4□□□□□ -0.1
SSX1Q16384 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.4□□□□□ -0.1
SSX1Q16384 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.4□□□□□ -0.1
SSX1Q16384 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.4□□□□□ -0.1
SSX1Q16384 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
SSX1Q16384 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.4□□□□□ -0.1
SSX1Q16384 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SSX1Q16384 AP001350.2-201ENST00000625104 1094 ntBASIC14.4□□□□□ -0.1
SSX1Q16384 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SSX1Q16384 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.4□□□□□ -0.1
SSX1Q16384 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.4□□□□□ -0.1
SSX1Q16384 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.4□□□□□ -0.1
SSX1Q16384 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.4□□□□□ -0.1
SSX1Q16384 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.4□□□□□ -0.1
SSX1Q16384 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSX1Q16384 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.4□□□□□ -0.1
SSX1Q16384 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SSX1Q16384 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
SSX1Q16384 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms