Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SSRP1Q08945 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.83■□□□□ 0.6
SSRP1Q08945 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.83■□□□□ 0.6
SSRP1Q08945 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SSRP1Q08945 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSRP1Q08945 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSRP1Q08945 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSRP1Q08945 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSRP1Q08945 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.83■□□□□ 0.6
SSRP1Q08945 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSRP1Q08945 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSRP1Q08945 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.83■□□□□ 0.6
SSRP1Q08945 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.83■□□□□ 0.6
SSRP1Q08945 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSRP1Q08945 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSRP1Q08945 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 AC112504.1-201ENST00000623415 1841 ntBASIC18.82■□□□□ 0.6
SSRP1Q08945 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.82■□□□□ 0.6
SSRP1Q08945 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.82■□□□□ 0.6
SSRP1Q08945 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.82■□□□□ 0.6
SSRP1Q08945 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.82■□□□□ 0.6
SSRP1Q08945 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.82■□□□□ 0.6
SSRP1Q08945 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.82■□□□□ 0.6
SSRP1Q08945 AP000344.2-201ENST00000512987 629 ntBASIC18.82■□□□□ 0.6
SSRP1Q08945 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.82■□□□□ 0.6
SSRP1Q08945 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.82■□□□□ 0.6
SSRP1Q08945 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.82■□□□□ 0.6
SSRP1Q08945 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SSRP1Q08945 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.82■□□□□ 0.6
SSRP1Q08945 AC022188.1-201ENST00000620960 1664 ntBASIC18.82■□□□□ 0.6
SSRP1Q08945 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSRP1Q08945 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.82■□□□□ 0.6
SSRP1Q08945 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SSRP1Q08945 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
SSRP1Q08945 AC008677.1-201ENST00000519230 1561 ntBASIC18.81■□□□□ 0.6
SSRP1Q08945 AP3S2-216ENST00000617003 1561 ntBASIC18.81■□□□□ 0.6
SSRP1Q08945 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.81■□□□□ 0.6
SSRP1Q08945 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SSRP1Q08945 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SSRP1Q08945 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSRP1Q08945 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSRP1Q08945 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSRP1Q08945 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.81■□□□□ 0.6
SSRP1Q08945 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.81■□□□□ 0.6
SSRP1Q08945 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.81■□□□□ 0.6
SSRP1Q08945 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
SSRP1Q08945 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SSRP1Q08945 HLA-H-201ENST00000383620 1096 ntBASIC18.81■□□□□ 0.6
SSRP1Q08945 KRT18P13-201ENST00000400056 1290 ntBASIC18.81■□□□□ 0.6
SSRP1Q08945 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSRP1Q08945 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.81■□□□□ 0.6
SSRP1Q08945 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.81■□□□□ 0.6
SSRP1Q08945 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.81■□□□□ 0.6
SSRP1Q08945 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSRP1Q08945 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSRP1Q08945 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSRP1Q08945 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.81■□□□□ 0.6
SSRP1Q08945 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SSRP1Q08945 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSRP1Q08945 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSRP1Q08945 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.81■□□□□ 0.6
SSRP1Q08945 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSRP1Q08945 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSRP1Q08945 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.81■□□□□ 0.6
SSRP1Q08945 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SSRP1Q08945 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSRP1Q08945 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
SSRP1Q08945 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SSRP1Q08945 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.8■□□□□ 0.6
SSRP1Q08945 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSRP1Q08945 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.8■□□□□ 0.6
SSRP1Q08945 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.8■□□□□ 0.6
SSRP1Q08945 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SSRP1Q08945 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.8■□□□□ 0.6
SSRP1Q08945 AL627223.1-201ENST00000416693 442 ntBASIC18.8■□□□□ 0.6
SSRP1Q08945 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.8■□□□□ 0.6
SSRP1Q08945 KRT18P32-201ENST00000424695 1287 ntBASIC18.8■□□□□ 0.6
SSRP1Q08945 FAM58DP-201ENST00000428076 619 ntBASIC18.8■□□□□ 0.6
SSRP1Q08945 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSRP1Q08945 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.8■□□□□ 0.6
SSRP1Q08945 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.8■□□□□ 0.6
SSRP1Q08945 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.8■□□□□ 0.6
SSRP1Q08945 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.8■□□□□ 0.6
SSRP1Q08945 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.8■□□□□ 0.6
SSRP1Q08945 AC004835.2-201ENST00000603762 682 ntBASIC18.8■□□□□ 0.6
SSRP1Q08945 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms