Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 AC090616.6-203ENST00000579186 1945 ntBASIC14.66□□□□□ -0.06
CDK5Q00535 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK5Q00535 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDK5Q00535 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.66□□□□□ -0.06
CDK5Q00535 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.65□□□□□ -0.06
CDK5Q00535 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.65□□□□□ -0.06
CDK5Q00535 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.65□□□□□ -0.06
CDK5Q00535 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.65□□□□□ -0.06
CDK5Q00535 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 LINC02228-204ENST00000642115 2962 ntBASIC14.65□□□□□ -0.06
CDK5Q00535 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.65□□□□□ -0.06
CDK5Q00535 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.65□□□□□ -0.06
CDK5Q00535 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDK5Q00535 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.65□□□□□ -0.06
CDK5Q00535 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.65□□□□□ -0.06
CDK5Q00535 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 CXCL1P1-201ENST00000502804 216 ntBASIC14.65□□□□□ -0.06
CDK5Q00535 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.65□□□□□ -0.06
CDK5Q00535 AC105339.3-201ENST00000560043 636 ntBASIC14.65□□□□□ -0.06
CDK5Q00535 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDK5Q00535 CLEC4GP1-201ENST00000596555 870 ntBASIC14.65□□□□□ -0.06
CDK5Q00535 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.65□□□□□ -0.06
CDK5Q00535 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.65□□□□□ -0.06
CDK5Q00535 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.65□□□□□ -0.06
CDK5Q00535 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.65□□□□□ -0.06
CDK5Q00535 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.65□□□□□ -0.06
CDK5Q00535 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CDK5Q00535 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
CDK5Q00535 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.65□□□□□ -0.06
CDK5Q00535 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDK5Q00535 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDK5Q00535 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK5Q00535 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDK5Q00535 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.64□□□□□ -0.07
CDK5Q00535 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
CDK5Q00535 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CDK5Q00535 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.64□□□□□ -0.07
CDK5Q00535 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.64□□□□□ -0.07
CDK5Q00535 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.64□□□□□ -0.07
CDK5Q00535 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.64□□□□□ -0.07
CDK5Q00535 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 RNPS1P1-201ENST00000507437 918 ntBASIC14.64□□□□□ -0.07
CDK5Q00535 AC073648.2-201ENST00000510116 352 ntBASIC14.64□□□□□ -0.07
CDK5Q00535 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.64□□□□□ -0.07
CDK5Q00535 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.64□□□□□ -0.07
CDK5Q00535 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.64□□□□□ -0.07
CDK5Q00535 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.64□□□□□ -0.07
CDK5Q00535 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.64□□□□□ -0.07
CDK5Q00535 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.64□□□□□ -0.07
CDK5Q00535 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 LINC01711-201ENST00000598340 967 ntBASIC14.64□□□□□ -0.07
CDK5Q00535 AC005593.1-201ENST00000624894 515 ntBASIC14.64□□□□□ -0.07
CDK5Q00535 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDK5Q00535 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CDK5Q00535 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.64□□□□□ -0.07
CDK5Q00535 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.64□□□□□ -0.07
CDK5Q00535 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDK5Q00535 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK5Q00535 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms