Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP3S2P59780 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
AP3S2P59780 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP3S2P59780 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 CICP23-201ENST00000605013 2741 ntBASIC13.99□□□□□ -0.17
AP3S2P59780 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S2P59780 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
AP3S2P59780 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S2P59780 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S2P59780 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.99□□□□□ -0.17
AP3S2P59780 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S2P59780 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S2P59780 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.99□□□□□ -0.17
AP3S2P59780 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S2P59780 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S2P59780 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S2P59780 KRT17P2-201ENST00000300992 1314 ntBASIC13.99□□□□□ -0.17
AP3S2P59780 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.99□□□□□ -0.17
AP3S2P59780 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S2P59780 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S2P59780 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S2P59780 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S2P59780 MIR718-201ENST00000390190 70 ntBASIC13.99□□□□□ -0.17
AP3S2P59780 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S2P59780 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.99□□□□□ -0.17
AP3S2P59780 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.99□□□□□ -0.17
AP3S2P59780 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S2P59780 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.99□□□□□ -0.17
AP3S2P59780 MIR4492-201ENST00000581627 80 ntBASIC13.99□□□□□ -0.17
AP3S2P59780 MIR4651-201ENST00000582622 73 ntBASIC13.99□□□□□ -0.17
AP3S2P59780 AL138966.2-201ENST00000621997 464 ntBASIC13.99□□□□□ -0.17
AP3S2P59780 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.99□□□□□ -0.17
AP3S2P59780 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
AP3S2P59780 AL359258.3-201ENST00000622910 2331 ntBASIC13.99□□□□□ -0.17
AP3S2P59780 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
AP3S2P59780 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S2P59780 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S2P59780 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
AP3S2P59780 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.99□□□□□ -0.17
AP3S2P59780 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S2P59780 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S2P59780 LINC00528-201ENST00000600723 2160 ntBASIC13.99□□□□□ -0.17
AP3S2P59780 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S2P59780 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
AP3S2P59780 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S2P59780 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S2P59780 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
AP3S2P59780 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S2P59780 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S2P59780 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S2P59780 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.98□□□□□ -0.17
AP3S2P59780 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.98□□□□□ -0.17
AP3S2P59780 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
AP3S2P59780 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
AP3S2P59780 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AP3S2P59780 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
AP3S2P59780 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.98□□□□□ -0.17
AP3S2P59780 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AP3S2P59780 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AP3S2P59780 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.98□□□□□ -0.17
AP3S2P59780 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.98□□□□□ -0.17
AP3S2P59780 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.98□□□□□ -0.17
AP3S2P59780 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.98□□□□□ -0.17
AP3S2P59780 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.98□□□□□ -0.17
AP3S2P59780 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
AP3S2P59780 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
AP3S2P59780 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.98□□□□□ -0.17
AP3S2P59780 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 TSPY7P-201ENST00000431358 1114 ntBASIC13.98□□□□□ -0.17
AP3S2P59780 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.98□□□□□ -0.17
AP3S2P59780 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.98□□□□□ -0.17
AP3S2P59780 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.98□□□□□ -0.17
AP3S2P59780 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.98□□□□□ -0.17
AP3S2P59780 LINC01238-205ENST00000567549 1107 ntBASIC13.98□□□□□ -0.17
AP3S2P59780 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
AP3S2P59780 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.98□□□□□ -0.17
AP3S2P59780 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
AP3S2P59780 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.98□□□□□ -0.17
AP3S2P59780 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
AP3S2P59780 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms