Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN12P56749 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 AC020658.6-201ENST00000623564 1870 ntBASIC14.18□□□□□ -0.14
CLDN12P56749 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN12P56749 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CLDN12P56749 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
CLDN12P56749 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.17□□□□□ -0.14
CLDN12P56749 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN12P56749 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CLDN12P56749 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN12P56749 AL109954.1-202ENST00000564051 2148 ntBASIC14.17□□□□□ -0.14
CLDN12P56749 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN12P56749 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN12P56749 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN12P56749 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CLDN12P56749 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CLDN12P56749 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN12P56749 RCN1P1-201ENST00000400413 996 ntBASIC14.17□□□□□ -0.14
CLDN12P56749 PTCHD3P3-201ENST00000403073 906 ntBASIC14.17□□□□□ -0.14
CLDN12P56749 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN12P56749 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.17□□□□□ -0.14
CLDN12P56749 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN12P56749 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 AC020765.3-201ENST00000613051 740 ntBASIC14.17□□□□□ -0.14
CLDN12P56749 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN12P56749 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN12P56749 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CLDN12P56749 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN12P56749 AL353732.1-201ENST00000569618 1459 ntBASIC14.17□□□□□ -0.14
CLDN12P56749 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CLDN12P56749 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN12P56749 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CLDN12P56749 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CLDN12P56749 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN12P56749 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLDN12P56749 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN12P56749 AC106881.1-201ENST00000605849 3329 ntBASIC14.17□□□□□ -0.14
CLDN12P56749 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
CLDN12P56749 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.16□□□□□ -0.14
CLDN12P56749 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN12P56749 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN12P56749 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CLDN12P56749 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 AC087641.1-201ENST00000557561 1021 ntBASIC14.16□□□□□ -0.14
CLDN12P56749 MIR3180-1-201ENST00000580374 94 ntBASIC14.16□□□□□ -0.14
CLDN12P56749 MIR3180-3-201ENST00000584616 94 ntBASIC14.16□□□□□ -0.14
CLDN12P56749 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
CLDN12P56749 AL589182.2-201ENST00000619332 1049 ntBASIC14.16□□□□□ -0.14
CLDN12P56749 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.16□□□□□ -0.14
CLDN12P56749 PGM5P2-202ENST00000637225 1043 ntBASIC14.16□□□□□ -0.14
CLDN12P56749 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CLDN12P56749 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.16□□□□□ -0.14
CLDN12P56749 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CLDN12P56749 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN12P56749 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN12P56749 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms