Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PER3P56645 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PER3P56645 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
PER3P56645 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PER3P56645 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.1■□□□□ 0.01
PER3P56645 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
PER3P56645 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
PER3P56645 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PER3P56645 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.1■□□□□ 0.01
PER3P56645 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.1■□□□□ 0.01
PER3P56645 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.1■□□□□ 0.01
PER3P56645 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.1■□□□□ 0.01
PER3P56645 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.1■□□□□ 0.01
PER3P56645 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PER3P56645 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.1■□□□□ 0.01
PER3P56645 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.1■□□□□ 0.01
PER3P56645 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.1■□□□□ 0.01
PER3P56645 AC009118.2-201ENST00000613275 655 ntBASIC15.1■□□□□ 0.01
PER3P56645 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PER3P56645 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.1■□□□□ 0.01
PER3P56645 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.1■□□□□ 0.01
PER3P56645 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.1■□□□□ 0.01
PER3P56645 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.1■□□□□ 0.01
PER3P56645 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PER3P56645 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PER3P56645 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PER3P56645 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.09■□□□□ 0.01
PER3P56645 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.09■□□□□ 0.01
PER3P56645 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PER3P56645 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.09■□□□□ 0.01
PER3P56645 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.09■□□□□ 0.01
PER3P56645 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.09■□□□□ 0.01
PER3P56645 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PER3P56645 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PER3P56645 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.09■□□□□ 0.01
PER3P56645 SPCS2P4-201ENST00000436160 681 ntBASIC15.09■□□□□ 0.01
PER3P56645 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.09■□□□□ 0.01
PER3P56645 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.09■□□□□ 0.01
PER3P56645 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.09■□□□□ 0.01
PER3P56645 AC005412.3-201ENST00000580309 715 ntBASIC15.09■□□□□ 0.01
PER3P56645 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.09■□□□□ 0.01
PER3P56645 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PER3P56645 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 EGFEM1P-202ENST00000431685 1563 ntBASIC15.09■□□□□ 0.01
PER3P56645 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.09■□□□□ 0.01
PER3P56645 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
PER3P56645 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.09■□□□□ 0.01
PER3P56645 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PER3P56645 AC099063.4-201ENST00000641099 1602 ntBASIC15.09■□□□□ 0.01
PER3P56645 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.09■□□□□ 0.01
PER3P56645 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.09■□□□□ 0.01
PER3P56645 AC093525.9-201ENST00000624961 1746 ntBASIC15.09■□□□□ 0.01
PER3P56645 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PER3P56645 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PER3P56645 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PER3P56645 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PER3P56645 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PER3P56645 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
PER3P56645 AL662844.4-201ENST00000606367 2838 ntBASIC15.08■□□□□ 0.01
PER3P56645 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PER3P56645 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PER3P56645 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.08■□□□□ 0
PER3P56645 PIN1P1-201ENST00000412108 996 ntBASIC15.08■□□□□ 0
PER3P56645 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.08■□□□□ 0
PER3P56645 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.08■□□□□ 0
PER3P56645 GPS2P2-201ENST00000430745 888 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms