Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.84■□□□□ 0.45
PMS1P54277 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 AL355306.1-201ENST00000415580 579 ntBASIC17.84■□□□□ 0.45
PMS1P54277 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.84■□□□□ 0.45
PMS1P54277 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.84■□□□□ 0.45
PMS1P54277 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.84■□□□□ 0.45
PMS1P54277 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.84■□□□□ 0.45
PMS1P54277 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.84■□□□□ 0.45
PMS1P54277 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PMS1P54277 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PMS1P54277 PPT1-215ENST00000641471 2368 ntBASIC17.83■□□□□ 0.45
PMS1P54277 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PMS1P54277 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
PMS1P54277 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.45
PMS1P54277 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PMS1P54277 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PMS1P54277 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PMS1P54277 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.83■□□□□ 0.45
PMS1P54277 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PMS1P54277 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.83■□□□□ 0.45
PMS1P54277 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PMS1P54277 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.83■□□□□ 0.45
PMS1P54277 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PMS1P54277 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PMS1P54277 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PMS1P54277 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
PMS1P54277 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PMS1P54277 MIR940-201ENST00000401276 94 ntBASIC17.83■□□□□ 0.44
PMS1P54277 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.83■□□□□ 0.44
PMS1P54277 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.83■□□□□ 0.44
PMS1P54277 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PMS1P54277 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.83■□□□□ 0.44
PMS1P54277 AC245100.5-201ENST00000452108 331 ntBASIC17.83■□□□□ 0.44
PMS1P54277 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.83■□□□□ 0.44
PMS1P54277 PGAM5P1-201ENST00000518923 814 ntBASIC17.83■□□□□ 0.44
PMS1P54277 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.83■□□□□ 0.44
PMS1P54277 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.83■□□□□ 0.44
PMS1P54277 AL135744.1-201ENST00000565098 629 ntBASIC17.83■□□□□ 0.44
PMS1P54277 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PMS1P54277 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.83■□□□□ 0.44
PMS1P54277 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PMS1P54277 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PMS1P54277 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PMS1P54277 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PMS1P54277 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PMS1P54277 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PMS1P54277 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PMS1P54277 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PMS1P54277 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PMS1P54277 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.83■□□□□ 0.44
PMS1P54277 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PMS1P54277 DBET-201ENST00000630918 3363 ntBASIC17.83■□□□□ 0.44
PMS1P54277 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.83■□□□□ 0.44
PMS1P54277 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.83■□□□□ 0.44
PMS1P54277 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PMS1P54277 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.83■□□□□ 0.44
PMS1P54277 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.82■□□□□ 0.44
PMS1P54277 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
PMS1P54277 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.82■□□□□ 0.44
PMS1P54277 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.82■□□□□ 0.44
PMS1P54277 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PMS1P54277 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PMS1P54277 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.82■□□□□ 0.44
PMS1P54277 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.82■□□□□ 0.44
PMS1P54277 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PMS1P54277 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PMS1P54277 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PMS1P54277 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PMS1P54277 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PMS1P54277 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.82■□□□□ 0.44
PMS1P54277 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PMS1P54277 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PMS1P54277 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.82■□□□□ 0.44
PMS1P54277 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.82■□□□□ 0.44
PMS1P54277 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PMS1P54277 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.82■□□□□ 0.44
PMS1P54277 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.82■□□□□ 0.44
PMS1P54277 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.82■□□□□ 0.44
PMS1P54277 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.82■□□□□ 0.44
PMS1P54277 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.82■□□□□ 0.44
PMS1P54277 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PMS1P54277 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.82■□□□□ 0.44
PMS1P54277 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.82■□□□□ 0.44
PMS1P54277 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PMS1P54277 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms