Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUBP1P53384 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUBP1P53384 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUBP1P53384 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUBP1P53384 KRT8P37-201ENST00000451609 1420 ntBASIC16.19■□□□□ 0.18
NUBP1P53384 AL132996.1-201ENST00000569865 1431 ntTSL 5 BASIC16.19■□□□□ 0.18
NUBP1P53384 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NUBP1P53384 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.19■□□□□ 0.18
NUBP1P53384 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.19■□□□□ 0.18
NUBP1P53384 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.19■□□□□ 0.18
NUBP1P53384 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NUBP1P53384 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.19■□□□□ 0.18
NUBP1P53384 AC134915.1-201ENST00000426461 574 ntBASIC16.19■□□□□ 0.18
NUBP1P53384 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.19■□□□□ 0.18
NUBP1P53384 AC005077.2-201ENST00000449786 690 ntBASIC16.19■□□□□ 0.18
NUBP1P53384 AC069277.2-201ENST00000454211 432 ntBASIC16.19■□□□□ 0.18
NUBP1P53384 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.19■□□□□ 0.18
NUBP1P53384 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC16.19■□□□□ 0.18
NUBP1P53384 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.19■□□□□ 0.18
NUBP1P53384 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC16.19■□□□□ 0.18
NUBP1P53384 ACTG1P17-201ENST00000558391 1119 ntBASIC16.19■□□□□ 0.18
NUBP1P53384 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.19■□□□□ 0.18
NUBP1P53384 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.19■□□□□ 0.18
NUBP1P53384 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.19■□□□□ 0.18
NUBP1P53384 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.19■□□□□ 0.18
NUBP1P53384 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.19■□□□□ 0.18
NUBP1P53384 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.19■□□□□ 0.18
NUBP1P53384 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC16.19■□□□□ 0.18
NUBP1P53384 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.19■□□□□ 0.18
NUBP1P53384 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC16.19■□□□□ 0.18
NUBP1P53384 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.19■□□□□ 0.18
NUBP1P53384 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NUBP1P53384 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NUBP1P53384 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NUBP1P53384 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.19■□□□□ 0.18
NUBP1P53384 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NUBP1P53384 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUBP1P53384 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NUBP1P53384 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
NUBP1P53384 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NUBP1P53384 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.18■□□□□ 0.18
NUBP1P53384 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NUBP1P53384 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.18■□□□□ 0.18
NUBP1P53384 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.18■□□□□ 0.18
NUBP1P53384 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.18■□□□□ 0.18
NUBP1P53384 C2orf27AP3-201ENST00000434123 579 ntBASIC16.18■□□□□ 0.18
NUBP1P53384 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC16.18■□□□□ 0.18
NUBP1P53384 AL591846.1-201ENST00000451736 433 ntBASIC16.18■□□□□ 0.18
NUBP1P53384 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC16.18■□□□□ 0.18
NUBP1P53384 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.18■□□□□ 0.18
NUBP1P53384 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.18■□□□□ 0.18
NUBP1P53384 AC087888.1-201ENST00000550884 1254 ntBASIC16.18■□□□□ 0.18
NUBP1P53384 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.18■□□□□ 0.18
NUBP1P53384 GTF2IP6-201ENST00000583143 541 ntBASIC16.18■□□□□ 0.18
NUBP1P53384 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NUBP1P53384 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 AC013467.2-201ENST00000605472 835 ntBASIC16.18■□□□□ 0.18
NUBP1P53384 NDE1P2-201ENST00000605569 1105 ntBASIC16.18■□□□□ 0.18
NUBP1P53384 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.18■□□□□ 0.18
NUBP1P53384 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.18■□□□□ 0.18
NUBP1P53384 AL354718.3-201ENST00000616414 581 ntBASIC16.18■□□□□ 0.18
NUBP1P53384 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NUBP1P53384 CR382287.1-201ENST00000623954 586 ntBASIC16.18■□□□□ 0.18
NUBP1P53384 AL158212.4-201ENST00000624062 1286 ntBASIC16.18■□□□□ 0.18
NUBP1P53384 LINC02246-207ENST00000630354 524 ntTSL 5 BASIC16.18■□□□□ 0.18
NUBP1P53384 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
NUBP1P53384 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.18■□□□□ 0.18
NUBP1P53384 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.18■□□□□ 0.18
NUBP1P53384 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.18■□□□□ 0.18
NUBP1P53384 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms