RNA–Protein interactions for RNA: ENST00000550884.2

AC087888.1-201, humanhuman

BASIC

Gene AC087888.1, Length 1,254 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087888.1-201ENST00000550884 AEBP2Q6ZN18 517 aaPredicted RBP32.68■■■□□ 2.82
AC087888.1-201ENST00000550884 CHIC1Q5VXU3 224 aa31.21■■■□□ 2.59
AC087888.1-201ENST00000550884 SENP3Q9H4L4 574 aaPredicted RBP27.66■■■□□ 2.02
AC087888.1-201ENST00000550884 PHF23Q9BUL5 403 aaPredicted RBP27.48■■□□□ 1.99
AC087888.1-201ENST00000550884 FOXD1Q16676 465 aa25.86■■□□□ 1.73
AC087888.1-201ENST00000550884 PLPPR3Q6T4P5 718 aa25■■□□□ 1.59
AC087888.1-201ENST00000550884 PPP6R1Q9UPN7 881 aa24.46■■□□□ 1.51
AC087888.1-201ENST00000550884 ADRA2BP18089 450 aa24.36■■□□□ 1.49
AC087888.1-201ENST00000550884 PIAS4Q8N2W9 510 aaPredicted RBP24.16■■□□□ 1.46
AC087888.1-201ENST00000550884 MSH5O43196 834 aa23.96■■□□□ 1.43
AC087888.1-201ENST00000550884 POTEDQ86YR6 584 aa23.02■■□□□ 1.28
AC087888.1-201ENST00000550884 MAPK8IP2Q13387 824 aaPredicted RBP22.32■■□□□ 1.16
AC087888.1-201ENST00000550884 SCAF1Q9H7N4 1312 aaKnown RBP22.1■■□□□ 1.13
AC087888.1-201ENST00000550884 DMRT2Q9Y5R5 561 aa22.03■■□□□ 1.12
AC087888.1-201ENST00000550884 PPP4R3CPQ6ZMV5 832 aa22.01■■□□□ 1.11
AC087888.1-201ENST00000550884 CNKSR2Q8WXI2 1034 aa21.48■■□□□ 1.03
AC087888.1-201ENST00000550884 HOXD11P31277 338 aaPredicted RBP21.34■■□□□ 1.01
AC087888.1-201ENST00000550884 RNF216Q9NWF9 866 aaPredicted RBP21.22■□□□□ 0.99
AC087888.1-201ENST00000550884 NCBP3Q53F19 620 aaKnown RBP21.14■□□□□ 0.97
AC087888.1-201ENST00000550884 DCAF8L1A6NGE4 600 aa21.07■□□□□ 0.96
AC087888.1-201ENST00000550884 NPM3O75607 178 aaKnown RBP20.97■□□□□ 0.95
AC087888.1-201ENST00000550884 KCNA4P22459 653 aa20.85■□□□□ 0.93
AC087888.1-201ENST00000550884 RNF39Q9H2S5 420 aa20.55■□□□□ 0.88
AC087888.1-201ENST00000550884 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
AC087888.1-201ENST00000550884 CACNB1Q02641 598 aaPredicted RBP20.41■□□□□ 0.86
AC087888.1-201ENST00000550884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.28■□□□□ 0.84
AC087888.1-201ENST00000550884 C1QBPQ07021 282 aaKnown RBP20.2■□□□□ 0.82
AC087888.1-201ENST00000550884 SLC4A2P04920 1241 aa20■□□□□ 0.79
AC087888.1-201ENST00000550884 U3KPZ7 1027 aaPredicted RBP19.97■□□□□ 0.79
AC087888.1-201ENST00000550884 SLC4A1APQ9BWU0 796 aaKnown RBP19.66■□□□□ 0.74
AC087888.1-201ENST00000550884 SPINK5Q9NQ38 1064 aaPredicted RBP19.62■□□□□ 0.73
AC087888.1-201ENST00000550884 CAPN15O75808 1086 aa19.48■□□□□ 0.71
AC087888.1-201ENST00000550884 DSG3P32926 999 aa19.36■□□□□ 0.69
AC087888.1-201ENST00000550884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.33■□□□□ 0.68
AC087888.1-201ENST00000550884 HNRNPUL2Q1KMD3 747 aaKnown RBP19.33■□□□□ 0.68
AC087888.1-201ENST00000550884 MYCNP04198 464 aaPredicted RBP19.3■□□□□ 0.68
AC087888.1-201ENST00000550884 FOXD4L1Q9NU39 408 aa19.29■□□□□ 0.68
AC087888.1-201ENST00000550884 SAMD1Q6SPF0 538 aaPredicted RBP19.28■□□□□ 0.68
AC087888.1-201ENST00000550884 TRHP20396 242 aaPredicted RBP19.26■□□□□ 0.67
AC087888.1-201ENST00000550884 ZBTB22O15209 634 aa19.23■□□□□ 0.67
AC087888.1-201ENST00000550884 APLP2Q06481 763 aa19.23■□□□□ 0.67
AC087888.1-201ENST00000550884 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
AC087888.1-201ENST00000550884 ABCB7O75027 752 aa19.11■□□□□ 0.65
AC087888.1-201ENST00000550884 ATF5Q9Y2D1 282 aaPredicted RBP18.99■□□□□ 0.63
AC087888.1-201ENST00000550884 POLA2Q14181 598 aa18.82■□□□□ 0.6
AC087888.1-201ENST00000550884 ATXN8OSP0DMR3 200 aa18.62■□□□□ 0.57
AC087888.1-201ENST00000550884 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
AC087888.1-201ENST00000550884 EHMT2Q96KQ7 1210 aa18.44■□□□□ 0.54
AC087888.1-201ENST00000550884 RBM42Q9BTD8 480 aaKnown RBP18.32■□□□□ 0.52
AC087888.1-201ENST00000550884 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
AC087888.1-201ENST00000550884 OSCARQ8IYS5 282 aa18.22■□□□□ 0.51
AC087888.1-201ENST00000550884 MKRN4PQ13434 485 aaPredicted RBP18.11■□□□□ 0.49
AC087888.1-201ENST00000550884 POTEHQ6S545 545 aa18.06■□□□□ 0.48
AC087888.1-201ENST00000550884 FBLN2P98095 1184 aa18.03■□□□□ 0.48
AC087888.1-201ENST00000550884 AKT1S1Q96B36 256 aa18.02■□□□□ 0.48
AC087888.1-201ENST00000550884 REM2Q8IYK8 340 aaPredicted RBP17.91■□□□□ 0.46
AC087888.1-201ENST00000550884 CHRDL2Q6WN34 429 aa17.9■□□□□ 0.46
AC087888.1-201ENST00000550884 SPDYE2BA6NHP3 402 aa17.85■□□□□ 0.45
AC087888.1-201ENST00000550884 SPDYE6P0CI01 402 aa17.85■□□□□ 0.45
AC087888.1-201ENST00000550884 SPDYE2Q495Y8 402 aa17.85■□□□□ 0.45
AC087888.1-201ENST00000550884 PITPNM1O00562 1244 aa17.72■□□□□ 0.43
AC087888.1-201ENST00000550884 ZNF692Q9BU19 519 aaPredicted RBP17.71■□□□□ 0.43
AC087888.1-201ENST00000550884 SSUH2Q9Y2M2 353 aa17.7■□□□□ 0.42
AC087888.1-201ENST00000550884 PIP4P2Q8N4L2 257 aa17.57■□□□□ 0.4
AC087888.1-201ENST00000550884 FXR2P51116 673 aaKnown RBP eCLIP17.51■□□□□ 0.39
AC087888.1-201ENST00000550884 PABPN1Q86U42 306 aaKnown RBP eCLIP17.48■□□□□ 0.39
AC087888.1-201ENST00000550884 SPDYE1Q8NFV5 336 aaPredicted RBP17.46■□□□□ 0.39
AC087888.1-201ENST00000550884 CLEC11AQ9Y240 323 aa17.46■□□□□ 0.39
AC087888.1-201ENST00000550884 SPDYE4A6NLX3 237 aa17.31■□□□□ 0.36
AC087888.1-201ENST00000550884 PRKAR2AP13861 404 aaKnown RBP17.25■□□□□ 0.35
AC087888.1-201ENST00000550884 PRR29P0C7W0 189 aa17.19■□□□□ 0.34
AC087888.1-201ENST00000550884 CHADLQ6NUI6 762 aa17.17■□□□□ 0.34
AC087888.1-201ENST00000550884 HAX1O00165 279 aa17.13■□□□□ 0.33
AC087888.1-201ENST00000550884 EVX2Q03828 476 aa17.08■□□□□ 0.32
AC087888.1-201ENST00000550884 SP7Q8TDD2 431 aaPredicted RBP17.05■□□□□ 0.32
AC087888.1-201ENST00000550884 PROM2Q8N271 834 aa16.98■□□□□ 0.31
AC087888.1-201ENST00000550884 STAG3Q9UJ98 1225 aa16.96■□□□□ 0.31
AC087888.1-201ENST00000550884 C19orf67A6NJJ6 358 aa16.93■□□□□ 0.3
AC087888.1-201ENST00000550884 CREBZFQ9NS37 354 aa16.91■□□□□ 0.3
AC087888.1-201ENST00000550884 FARP1Q9Y4F1 1045 aaPredicted RBP16.89■□□□□ 0.29
AC087888.1-201ENST00000550884 FKBP8Q14318 412 aa16.76■□□□□ 0.27
AC087888.1-201ENST00000550884 CD44P16070 742 aaKnown RBP16.7■□□□□ 0.26
AC087888.1-201ENST00000550884 MNX1P50219 401 aaPredicted RBP16.69■□□□□ 0.26
AC087888.1-201ENST00000550884 GABBR2O75899 941 aa16.62■□□□□ 0.25
AC087888.1-201ENST00000550884 ZRANB1Q9UGI0 708 aa16.52■□□□□ 0.24
AC087888.1-201ENST00000550884 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
AC087888.1-201ENST00000550884 MIER1Q8N108 512 aa16.46■□□□□ 0.23
AC087888.1-201ENST00000550884 ZNF579Q8NAF0 562 aaKnown RBP16.46■□□□□ 0.23
AC087888.1-201ENST00000550884 PHF12Q96QT6 1004 aa16.35■□□□□ 0.21
AC087888.1-201ENST00000550884 POTEIP0CG38 1075 aa16.34■□□□□ 0.21
AC087888.1-201ENST00000550884 PLCD3Q8N3E9 789 aa16.34■□□□□ 0.21
AC087888.1-201ENST00000550884 PAK3O75914 559 aaPredicted RBP16.33■□□□□ 0.2
AC087888.1-201ENST00000550884 GALR2O43603 387 aaPredicted RBP16.3■□□□□ 0.2
AC087888.1-201ENST00000550884 PLEKHG5O94827 1062 aa16.3■□□□□ 0.2
AC087888.1-201ENST00000550884 CLCN6P51797 869 aa16.3■□□□□ 0.2
AC087888.1-201ENST00000550884 TSPYL2Q9H2G4 693 aaPredicted RBP16.28■□□□□ 0.2
AC087888.1-201ENST00000550884 RASEFQ8IZ41 740 aa16.26■□□□□ 0.19
AC087888.1-201ENST00000550884 FBXO3Q9UK99 471 aa16.22■□□□□ 0.19
AC087888.1-201ENST00000550884 CCDC61Q9Y6R9 512 aa16.22■□□□□ 0.19
AC087888.1-201ENST00000550884 NUBP1P53384 320 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms