RNA–Protein interactions for RNA: ENST00000630354.1

LINC02246-207, Transcript of long intergenic non-protein coding RNA 2246, humanhuman

TSL 5 BASIC

Gene LINC02246, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02246-207ENST00000630354 AEBP2Q6ZN18 517 aaPredicted RBP32.19■■■□□ 2.74
LINC02246-207ENST00000630354 CHIC1Q5VXU3 224 aa30.96■■■□□ 2.55
LINC02246-207ENST00000630354 SENP3Q9H4L4 574 aaPredicted RBP27.31■■□□□ 1.96
LINC02246-207ENST00000630354 PHF23Q9BUL5 403 aaPredicted RBP27.23■■□□□ 1.95
LINC02246-207ENST00000630354 NISCHQ9Y2I1 1504 aa27.12■■□□□ 1.93
LINC02246-207ENST00000630354 FOXD1Q16676 465 aa25.46■■□□□ 1.67
LINC02246-207ENST00000630354 PLPPR3Q6T4P5 718 aa24.92■■□□□ 1.58
LINC02246-207ENST00000630354 CCDC180Q9P1Z9 1646 aa24.4■■□□□ 1.5
LINC02246-207ENST00000630354 ABCC9O60706 1549 aa24.31■■□□□ 1.48
LINC02246-207ENST00000630354 PPP6R1Q9UPN7 881 aa24.2■■□□□ 1.46
LINC02246-207ENST00000630354 ADRA2BP18089 450 aa24.14■■□□□ 1.45
LINC02246-207ENST00000630354 PIAS4Q8N2W9 510 aaPredicted RBP23.89■■□□□ 1.41
LINC02246-207ENST00000630354 MSH5O43196 834 aa23.58■■□□□ 1.37
LINC02246-207ENST00000630354 RB1CC1Q8TDY2 1594 aa23.22■■□□□ 1.31
LINC02246-207ENST00000630354 NACADO15069 1562 aa23.07■■□□□ 1.28
LINC02246-207ENST00000630354 DNAJC5BQ9UF47 199 aa22.8■■□□□ 1.24
LINC02246-207ENST00000630354 MYO15BQ96JP2 1530 aa22.8■■□□□ 1.24
LINC02246-207ENST00000630354 DCAF8L2P0C7V8 631 aa22.77■■□□□ 1.24
LINC02246-207ENST00000630354 UNC13AQ9UPW8 1703 aa22.67■■□□□ 1.22
LINC02246-207ENST00000630354 PABPN1Q86U42 306 aaKnown RBP eCLIP22.59■■□□□ 1.21
LINC02246-207ENST00000630354 BICRAQ9NZM4 1560 aa22.51■■□□□ 1.19
LINC02246-207ENST00000630354 ZCCHC6Q5VYS8 1495 aaKnown RBP22.49■■□□□ 1.19
LINC02246-207ENST00000630354 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
LINC02246-207ENST00000630354 SHROOM4Q9ULL8 1493 aa22.32■■□□□ 1.16
LINC02246-207ENST00000630354 POTEDQ86YR6 584 aa22.31■■□□□ 1.16
LINC02246-207ENST00000630354 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
LINC02246-207ENST00000630354 MAPK8IP2Q13387 824 aaPredicted RBP22.06■■□□□ 1.12
LINC02246-207ENST00000630354 CC2D2AQ9P2K1 1620 aa22■■□□□ 1.11
LINC02246-207ENST00000630354 SCAF1Q9H7N4 1312 aaKnown RBP21.99■■□□□ 1.11
LINC02246-207ENST00000630354 EIF4G1Q04637 1599 aaKnown RBP21.96■■□□□ 1.11
LINC02246-207ENST00000630354 PPP4R3CPQ6ZMV5 832 aa21.94■■□□□ 1.1
LINC02246-207ENST00000630354 CECR2Q9BXF3 1484 aa21.94■■□□□ 1.1
LINC02246-207ENST00000630354 DMRT2Q9Y5R5 561 aa21.74■■□□□ 1.07
LINC02246-207ENST00000630354 CNKSR2Q8WXI2 1034 aa21.39■■□□□ 1.01
LINC02246-207ENST00000630354 NCAPD3P42695 1498 aa21.28■■□□□ 1
LINC02246-207ENST00000630354 NCBP3Q53F19 620 aaKnown RBP21.19■□□□□ 0.98
LINC02246-207ENST00000630354 ATAD2BQ9ULI0 1458 aa21.19■□□□□ 0.98
LINC02246-207ENST00000630354 SMARCA4P51532 1647 aa21.16■□□□□ 0.98
LINC02246-207ENST00000630354 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
LINC02246-207ENST00000630354 HMGXB3Q12766 1538 aa21.14■□□□□ 0.97
LINC02246-207ENST00000630354 HOXD11P31277 338 aaPredicted RBP21.12■□□□□ 0.97
LINC02246-207ENST00000630354 BAZ1AQ9NRL2 1556 aaPredicted RBP21.08■□□□□ 0.97
LINC02246-207ENST00000630354 RNF216Q9NWF9 866 aaPredicted RBP21.08■□□□□ 0.97
LINC02246-207ENST00000630354 CUX2O14529 1486 aa21.07■□□□□ 0.96
LINC02246-207ENST00000630354 DNAJC5Q9H3Z4 198 aa21.03■□□□□ 0.96
LINC02246-207ENST00000630354 ERCC6Q03468 1493 aa21.02■□□□□ 0.96
LINC02246-207ENST00000630354 PEG3Q9GZU2 1588 aa21.01■□□□□ 0.95
LINC02246-207ENST00000630354 BAZ1BQ9UIG0 1483 aaKnown RBP20.97■□□□□ 0.95
LINC02246-207ENST00000630354 KCNA4P22459 653 aa20.96■□□□□ 0.95
LINC02246-207ENST00000630354 NPM3O75607 178 aaKnown RBP20.93■□□□□ 0.94
LINC02246-207ENST00000630354 DCAF8L1A6NGE4 600 aa20.89■□□□□ 0.93
LINC02246-207ENST00000630354 NESP48681 1621 aa20.88■□□□□ 0.93
LINC02246-207ENST00000630354 MROH2BQ7Z745 1585 aa20.87■□□□□ 0.93
LINC02246-207ENST00000630354 LAMC3Q9Y6N6 1575 aa20.81■□□□□ 0.92
LINC02246-207ENST00000630354 THOC2Q8NI27 1593 aaKnown RBP20.73■□□□□ 0.91
LINC02246-207ENST00000630354 PDS5BQ9NTI5 1447 aa20.69■□□□□ 0.9
LINC02246-207ENST00000630354 KIF21AQ7Z4S6 1674 aa20.64■□□□□ 0.89
LINC02246-207ENST00000630354 CADPSQ9ULU8 1353 aa20.61■□□□□ 0.89
LINC02246-207ENST00000630354 WIZO95785 1651 aa20.61■□□□□ 0.89
LINC02246-207ENST00000630354 MRC2Q9UBG0 1479 aa20.49■□□□□ 0.87
LINC02246-207ENST00000630354 WDR62O43379 1518 aa20.45■□□□□ 0.86
LINC02246-207ENST00000630354 RSF1Q96T23 1441 aaPredicted RBP20.44■□□□□ 0.86
LINC02246-207ENST00000630354 CEP164Q9UPV0 1460 aa20.4■□□□□ 0.86
LINC02246-207ENST00000630354 TOP2AP11388 1531 aaKnown RBP20.39■□□□□ 0.85
LINC02246-207ENST00000630354 CFTRP13569 1480 aa20.39■□□□□ 0.85
LINC02246-207ENST00000630354 FANCD2Q9BXW9 1451 aa20.37■□□□□ 0.85
LINC02246-207ENST00000630354 PRDM2Q13029 1718 aa20.22■□□□□ 0.83
LINC02246-207ENST00000630354 URB2Q14146 1524 aaKnown RBP20.19■□□□□ 0.82
LINC02246-207ENST00000630354 RNF39Q9H2S5 420 aa20.19■□□□□ 0.82
LINC02246-207ENST00000630354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.15■□□□□ 0.82
LINC02246-207ENST00000630354 CCDC88BA6NC98 1476 aa20.12■□□□□ 0.81
LINC02246-207ENST00000630354 OSCARQ8IYS5 282 aa20.04■□□□□ 0.8
LINC02246-207ENST00000630354 IFT140Q96RY7 1462 aa20.01■□□□□ 0.79
LINC02246-207ENST00000630354 CACNB1Q02641 598 aaPredicted RBP20.01■□□□□ 0.79
LINC02246-207ENST00000630354 TRIM41Q8WV44 630 aa20■□□□□ 0.79
LINC02246-207ENST00000630354 ABCC8Q09428 1581 aa20■□□□□ 0.79
LINC02246-207ENST00000630354 TOPBP1Q92547 1522 aa19.98■□□□□ 0.79
LINC02246-207ENST00000630354 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
LINC02246-207ENST00000630354 DNMBPQ6XZF7 1577 aa19.92■□□□□ 0.78
LINC02246-207ENST00000630354 C1QBPQ07021 282 aaKnown RBP19.9■□□□□ 0.78
LINC02246-207ENST00000630354 SLC4A2P04920 1241 aa19.88■□□□□ 0.77
LINC02246-207ENST00000630354 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
LINC02246-207ENST00000630354 EIF4G3O43432 1585 aaKnown RBP19.84■□□□□ 0.77
LINC02246-207ENST00000630354 TARBP1Q13395 1621 aaKnown RBP19.81■□□□□ 0.76
LINC02246-207ENST00000630354 RIMBP3CA6NJZ7 1639 aa19.78■□□□□ 0.76
LINC02246-207ENST00000630354 RIMBP3BA6NNM3 1639 aa19.78■□□□□ 0.76
LINC02246-207ENST00000630354 RIMBP3Q9UFD9 1639 aa19.78■□□□□ 0.76
LINC02246-207ENST00000630354 U3KPZ7 1027 aaPredicted RBP19.78■□□□□ 0.76
LINC02246-207ENST00000630354 POLA1P09884 1462 aaPredicted RBP19.78■□□□□ 0.76
LINC02246-207ENST00000630354 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.75
LINC02246-207ENST00000630354 ARHGEF11O15085 1522 aa19.72■□□□□ 0.75
LINC02246-207ENST00000630354 CHD1O14646 1710 aa19.7■□□□□ 0.74
LINC02246-207ENST00000630354 WDR97A6NE52 1622 aa19.69■□□□□ 0.74
LINC02246-207ENST00000630354 SOGA1O94964 1423 aa19.68■□□□□ 0.74
LINC02246-207ENST00000630354 RAD54L2Q9Y4B4 1467 aa19.66■□□□□ 0.74
LINC02246-207ENST00000630354 FGD5Q6ZNL6 1462 aa19.63■□□□□ 0.73
LINC02246-207ENST00000630354 CUX1P39880 1505 aa19.61■□□□□ 0.73
LINC02246-207ENST00000630354 TDRD9Q8NDG6 1382 aaKnown RBP19.6■□□□□ 0.73
LINC02246-207ENST00000630354 FBLN2P98095 1184 aa19.57■□□□□ 0.72
LINC02246-207ENST00000630354 SNAPC4Q5SXM2 1469 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms