Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPT1AP50416 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.83■□□□□ 0.44
CPT1AP50416 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPT1AP50416 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.82■□□□□ 0.44
CPT1AP50416 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPT1AP50416 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.82■□□□□ 0.44
CPT1AP50416 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPT1AP50416 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPT1AP50416 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CPT1AP50416 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPT1AP50416 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPT1AP50416 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPT1AP50416 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.82■□□□□ 0.44
CPT1AP50416 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.82■□□□□ 0.44
CPT1AP50416 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPT1AP50416 TARDBPP1-201ENST00000442013 1203 ntBASIC17.82■□□□□ 0.44
CPT1AP50416 AC022494.1-201ENST00000466044 728 ntBASIC17.82■□□□□ 0.44
CPT1AP50416 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CPT1AP50416 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CPT1AP50416 AC104989.1-201ENST00000519711 778 ntBASIC17.82■□□□□ 0.44
CPT1AP50416 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.82■□□□□ 0.44
CPT1AP50416 AC233724.13-201ENST00000598383 410 ntBASIC17.82■□□□□ 0.44
CPT1AP50416 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.82■□□□□ 0.44
CPT1AP50416 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.82■□□□□ 0.44
CPT1AP50416 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.82■□□□□ 0.44
CPT1AP50416 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.82■□□□□ 0.44
CPT1AP50416 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPT1AP50416 AC106820.2-201ENST00000563775 3264 ntBASIC17.82■□□□□ 0.44
CPT1AP50416 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.82■□□□□ 0.44
CPT1AP50416 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CPT1AP50416 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPT1AP50416 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPT1AP50416 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.82■□□□□ 0.44
CPT1AP50416 UBALD1-205ENST00000590891 2641 ntBASIC17.82■□□□□ 0.44
CPT1AP50416 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPT1AP50416 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.82■□□□□ 0.44
CPT1AP50416 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPT1AP50416 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.81■□□□□ 0.44
CPT1AP50416 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CPT1AP50416 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CPT1AP50416 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.81■□□□□ 0.44
CPT1AP50416 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CPT1AP50416 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CPT1AP50416 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CPT1AP50416 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.81■□□□□ 0.44
CPT1AP50416 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.81■□□□□ 0.44
CPT1AP50416 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
CPT1AP50416 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.81■□□□□ 0.44
CPT1AP50416 CROCCP4-201ENST00000457096 498 ntBASIC17.81■□□□□ 0.44
CPT1AP50416 FAM86LP-201ENST00000478302 853 ntBASIC17.81■□□□□ 0.44
CPT1AP50416 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 USP32P1-208ENST00000506594 1164 ntBASIC17.81■□□□□ 0.44
CPT1AP50416 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.81■□□□□ 0.44
CPT1AP50416 SNX29P1-201ENST00000548357 1007 ntBASIC17.81■□□□□ 0.44
CPT1AP50416 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.81■□□□□ 0.44
CPT1AP50416 CU634019.7-201ENST00000624153 1185 ntBASIC17.81■□□□□ 0.44
CPT1AP50416 FP236241.2-201ENST00000624906 1185 ntBASIC17.81■□□□□ 0.44
CPT1AP50416 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CPT1AP50416 BNIP3P1-202ENST00000550043 1585 ntBASIC17.81■□□□□ 0.44
CPT1AP50416 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CPT1AP50416 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPT1AP50416 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CPT1AP50416 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.8■□□□□ 0.44
CPT1AP50416 AC018665.1-201ENST00000622927 1362 ntBASIC17.8■□□□□ 0.44
CPT1AP50416 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPT1AP50416 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPT1AP50416 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CPT1AP50416 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPT1AP50416 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CPT1AP50416 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPT1AP50416 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.8■□□□□ 0.44
CPT1AP50416 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPT1AP50416 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CPT1AP50416 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.8■□□□□ 0.44
CPT1AP50416 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.8■□□□□ 0.44
CPT1AP50416 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.8■□□□□ 0.44
CPT1AP50416 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.8■□□□□ 0.44
CPT1AP50416 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.8■□□□□ 0.44
CPT1AP50416 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CPT1AP50416 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.8■□□□□ 0.44
CPT1AP50416 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms