Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.81□□□□□ -0.04
CENPAP49450 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.81□□□□□ -0.04
CENPAP49450 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.81□□□□□ -0.04
CENPAP49450 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CENPAP49450 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.81□□□□□ -0.04
CENPAP49450 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CENPAP49450 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.8□□□□□ -0.04
CENPAP49450 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 PCGF3-213ENST00000620529 1899 ntBASIC14.8□□□□□ -0.04
CENPAP49450 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.8□□□□□ -0.04
CENPAP49450 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CENPAP49450 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CENPAP49450 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CENPAP49450 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CENPAP49450 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.8□□□□□ -0.04
CENPAP49450 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CENPAP49450 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CENPAP49450 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 AC073621.1-201ENST00000392730 636 ntBASIC14.8□□□□□ -0.04
CENPAP49450 MRPL20P1-201ENST00000400819 433 ntBASIC14.8□□□□□ -0.04
CENPAP49450 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.8□□□□□ -0.04
CENPAP49450 DUSP5P1-201ENST00000441325 1139 ntBASIC14.8□□□□□ -0.04
CENPAP49450 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CENPAP49450 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.8□□□□□ -0.04
CENPAP49450 AC107918.2-201ENST00000530817 355 ntBASIC14.8□□□□□ -0.04
CENPAP49450 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.8□□□□□ -0.04
CENPAP49450 AC008667.4-201ENST00000607370 168 ntBASIC14.8□□□□□ -0.04
CENPAP49450 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.8□□□□□ -0.04
CENPAP49450 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.8□□□□□ -0.04
CENPAP49450 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.8□□□□□ -0.04
CENPAP49450 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.8□□□□□ -0.04
CENPAP49450 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.8□□□□□ -0.04
CENPAP49450 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CENPAP49450 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.8□□□□□ -0.04
CENPAP49450 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CENPAP49450 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CENPAP49450 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.79□□□□□ -0.04
CENPAP49450 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
CENPAP49450 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CENPAP49450 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.79□□□□□ -0.04
CENPAP49450 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CENPAP49450 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.79□□□□□ -0.04
CENPAP49450 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CENPAP49450 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CENPAP49450 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CENPAP49450 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.79□□□□□ -0.04
CENPAP49450 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms