Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AL162727.3-201ENST00000635661 2787 ntBASIC15.62■□□□□ 0.09
SLC6A12P48065 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SLC6A12P48065 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
SLC6A12P48065 AC004461.1-201ENST00000412461 403 ntBASIC15.62■□□□□ 0.09
SLC6A12P48065 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.62■□□□□ 0.09
SLC6A12P48065 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
SLC6A12P48065 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.62■□□□□ 0.09
SLC6A12P48065 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.62■□□□□ 0.09
SLC6A12P48065 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.62■□□□□ 0.09
SLC6A12P48065 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC6A12P48065 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.62■□□□□ 0.09
SLC6A12P48065 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.62■□□□□ 0.09
SLC6A12P48065 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.62■□□□□ 0.09
SLC6A12P48065 AC243562.2-201ENST00000561247 970 ntBASIC15.62■□□□□ 0.09
SLC6A12P48065 AC093520.2-201ENST00000561830 333 ntBASIC15.62■□□□□ 0.09
SLC6A12P48065 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.62■□□□□ 0.09
SLC6A12P48065 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC6A12P48065 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.62■□□□□ 0.09
SLC6A12P48065 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
SLC6A12P48065 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC6A12P48065 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
SLC6A12P48065 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SLC6A12P48065 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SLC6A12P48065 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SLC6A12P48065 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
SLC6A12P48065 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SLC6A12P48065 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SLC6A12P48065 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
SLC6A12P48065 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SLC6A12P48065 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 UPF3AP3-201ENST00000420996 769 ntBASIC15.61■□□□□ 0.09
SLC6A12P48065 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.61■□□□□ 0.09
SLC6A12P48065 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.61■□□□□ 0.09
SLC6A12P48065 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC6A12P48065 RARRES2P9-201ENST00000565168 469 ntBASIC15.61■□□□□ 0.09
SLC6A12P48065 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.61■□□□□ 0.09
SLC6A12P48065 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC6A12P48065 MIR3687-2-201ENST00000577708 61 ntBASIC15.61■□□□□ 0.09
SLC6A12P48065 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC6A12P48065 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC6A12P48065 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
SLC6A12P48065 MIR3687-1-201ENST00000614492 61 ntBASIC15.61■□□□□ 0.09
SLC6A12P48065 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SLC6A12P48065 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SLC6A12P48065 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC6A12P48065 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SLC6A12P48065 BNIP3P1-202ENST00000550043 1585 ntBASIC15.61■□□□□ 0.09
SLC6A12P48065 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC6A12P48065 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A12P48065 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC6A12P48065 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
SLC6A12P48065 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SLC6A12P48065 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC6A12P48065 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC6A12P48065 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC6A12P48065 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC6A12P48065 AL136982.4-201ENST00000437689 1740 ntBASIC15.6■□□□□ 0.09
SLC6A12P48065 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC6A12P48065 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SLC6A12P48065 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC6A12P48065 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC6A12P48065 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC6A12P48065 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC6A12P48065 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
SLC6A12P48065 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.6■□□□□ 0.09
SLC6A12P48065 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms