Protein–RNA interactions for Protein: P28290

SSFA2, Sperm-specific antigen 2, humanhuman

Predictions only

Length 1,259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2P28290 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSFA2P28290 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SSFA2P28290 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSFA2P28290 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.78■□□□□ 0.92
SSFA2P28290 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.78■□□□□ 0.92
SSFA2P28290 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SSFA2P28290 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSFA2P28290 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.78■□□□□ 0.92
SSFA2P28290 AC093724.1-201ENST00000448659 1027 ntBASIC20.78■□□□□ 0.92
SSFA2P28290 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.78■□□□□ 0.92
SSFA2P28290 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SSFA2P28290 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSFA2P28290 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.78■□□□□ 0.92
SSFA2P28290 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.78■□□□□ 0.92
SSFA2P28290 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.78■□□□□ 0.92
SSFA2P28290 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.78■□□□□ 0.92
SSFA2P28290 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.78■□□□□ 0.92
SSFA2P28290 MIR4538-201ENST00000581377 78 ntBASIC20.78■□□□□ 0.92
SSFA2P28290 AL033527.5-201ENST00000641382 801 ntBASIC20.78■□□□□ 0.92
SSFA2P28290 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSFA2P28290 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.78■□□□□ 0.92
SSFA2P28290 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSFA2P28290 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSFA2P28290 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.78■□□□□ 0.92
SSFA2P28290 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SSFA2P28290 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSFA2P28290 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSFA2P28290 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSFA2P28290 KRT8P39-201ENST00000396270 1433 ntBASIC20.78■□□□□ 0.92
SSFA2P28290 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SSFA2P28290 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
SSFA2P28290 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSFA2P28290 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSFA2P28290 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.77■□□□□ 0.92
SSFA2P28290 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSFA2P28290 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
SSFA2P28290 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SSFA2P28290 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SSFA2P28290 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SSFA2P28290 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.77■□□□□ 0.92
SSFA2P28290 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSFA2P28290 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SSFA2P28290 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SSFA2P28290 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.77■□□□□ 0.92
SSFA2P28290 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSFA2P28290 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.77■□□□□ 0.92
SSFA2P28290 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.77■□□□□ 0.92
SSFA2P28290 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.77■□□□□ 0.92
SSFA2P28290 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.77■□□□□ 0.92
SSFA2P28290 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.77■□□□□ 0.92
SSFA2P28290 ACTBP11-201ENST00000436287 1126 ntBASIC20.77■□□□□ 0.92
SSFA2P28290 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.77■□□□□ 0.92
SSFA2P28290 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.77■□□□□ 0.92
SSFA2P28290 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SSFA2P28290 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.77■□□□□ 0.92
SSFA2P28290 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSFA2P28290 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC20.77■□□□□ 0.92
SSFA2P28290 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.77■□□□□ 0.92
SSFA2P28290 MIR8072-201ENST00000614241 80 ntBASIC20.77■□□□□ 0.92
SSFA2P28290 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
SSFA2P28290 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSFA2P28290 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.77■□□□□ 0.92
SSFA2P28290 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSFA2P28290 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSFA2P28290 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SSFA2P28290 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSFA2P28290 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SSFA2P28290 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
SSFA2P28290 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
SSFA2P28290 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SSFA2P28290 AC005915.1-201ENST00000624912 2018 ntBASIC20.77■□□□□ 0.91
SSFA2P28290 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SSFA2P28290 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.77■□□□□ 0.91
SSFA2P28290 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSFA2P28290 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSFA2P28290 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSFA2P28290 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.76■□□□□ 0.91
SSFA2P28290 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSFA2P28290 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSFA2P28290 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SSFA2P28290 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSFA2P28290 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.76■□□□□ 0.91
SSFA2P28290 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.76■□□□□ 0.91
SSFA2P28290 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSFA2P28290 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
SSFA2P28290 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSFA2P28290 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.76■□□□□ 0.91
SSFA2P28290 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC20.76■□□□□ 0.91
SSFA2P28290 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.76■□□□□ 0.91
SSFA2P28290 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSFA2P28290 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.76■□□□□ 0.91
SSFA2P28290 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.76■□□□□ 0.91
SSFA2P28290 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSFA2P28290 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSFA2P28290 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSFA2P28290 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SSFA2P28290 SNX33P1-201ENST00000592116 1762 ntBASIC20.76■□□□□ 0.91
SSFA2P28290 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSFA2P28290 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSFA2P28290 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms