Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.41■□□□□ 0.22
CCND1P24385 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCND1P24385 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CCND1P24385 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.41■□□□□ 0.22
CCND1P24385 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.41■□□□□ 0.22
CCND1P24385 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.41■□□□□ 0.22
CCND1P24385 RNA5SP419-201ENST00000515908 135 ntBASIC16.41■□□□□ 0.22
CCND1P24385 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.41■□□□□ 0.22
CCND1P24385 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.41■□□□□ 0.22
CCND1P24385 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.41■□□□□ 0.22
CCND1P24385 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCND1P24385 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.41■□□□□ 0.22
CCND1P24385 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CCND1P24385 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.41■□□□□ 0.22
CCND1P24385 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.41■□□□□ 0.22
CCND1P24385 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 HLA-A-201ENST00000376802 1334 ntBASIC16.41■□□□□ 0.22
CCND1P24385 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.41■□□□□ 0.22
CCND1P24385 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.41■□□□□ 0.22
CCND1P24385 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.41■□□□□ 0.22
CCND1P24385 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCND1P24385 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.4■□□□□ 0.22
CCND1P24385 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.4■□□□□ 0.22
CCND1P24385 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.4■□□□□ 0.22
CCND1P24385 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCND1P24385 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.4■□□□□ 0.22
CCND1P24385 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.4■□□□□ 0.22
CCND1P24385 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.4■□□□□ 0.22
CCND1P24385 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 AC005089.1-201ENST00000619486 2241 ntBASIC16.4■□□□□ 0.22
CCND1P24385 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.4■□□□□ 0.22
CCND1P24385 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.4■□□□□ 0.22
CCND1P24385 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CCND1P24385 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CCND1P24385 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
CCND1P24385 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.4■□□□□ 0.22
CCND1P24385 PRSS29P-201ENST00000440800 595 ntBASIC16.4■□□□□ 0.22
CCND1P24385 AC009078.2-202ENST00000463353 338 ntBASIC16.4■□□□□ 0.22
CCND1P24385 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.4■□□□□ 0.22
CCND1P24385 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.4■□□□□ 0.22
CCND1P24385 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CCND1P24385 AC091167.2-201ENST00000579581 588 ntBASIC16.4■□□□□ 0.22
CCND1P24385 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.4■□□□□ 0.22
CCND1P24385 AC116407.3-201ENST00000623905 1129 ntBASIC16.4■□□□□ 0.22
CCND1P24385 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.4■□□□□ 0.22
CCND1P24385 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CCND1P24385 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CCND1P24385 LINC00895-201ENST00000629028 1637 ntBASIC16.4■□□□□ 0.22
CCND1P24385 AL645728.1-201ENST00000366221 2101 ntBASIC16.4■□□□□ 0.22
CCND1P24385 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.4■□□□□ 0.22
CCND1P24385 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCND1P24385 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCND1P24385 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
CCND1P24385 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCND1P24385 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.39■□□□□ 0.21
CCND1P24385 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCND1P24385 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CCND1P24385 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.39■□□□□ 0.21
CCND1P24385 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCND1P24385 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCND1P24385 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCND1P24385 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CCND1P24385 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCND1P24385 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCND1P24385 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCND1P24385 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCND1P24385 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCND1P24385 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms