Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
RAB4AP20338 EGFEM1P-202ENST00000431685 1563 ntBASIC12.52□□□□□ -0.41
RAB4AP20338 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB4AP20338 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RAB4AP20338 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB4AP20338 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB4AP20338 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RAB4AP20338 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 ABHD17AP1-201ENST00000358206 933 ntBASIC12.51□□□□□ -0.41
RAB4AP20338 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 TSPY12P-201ENST00000421279 868 ntBASIC12.51□□□□□ -0.41
RAB4AP20338 AC096633.1-201ENST00000422446 749 ntBASIC12.51□□□□□ -0.41
RAB4AP20338 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.51□□□□□ -0.41
RAB4AP20338 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.51□□□□□ -0.41
RAB4AP20338 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.51□□□□□ -0.41
RAB4AP20338 AP001412.1-201ENST00000608405 714 ntBASIC12.51□□□□□ -0.41
RAB4AP20338 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB4AP20338 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 TCAF1P1-201ENST00000414990 2232 ntBASIC12.51□□□□□ -0.41
RAB4AP20338 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB4AP20338 AC027612.1-201ENST00000445234 2395 ntBASIC12.51□□□□□ -0.41
RAB4AP20338 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB4AP20338 AC131212.3-201ENST00000624087 4219 ntBASIC12.51□□□□□ -0.41
RAB4AP20338 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB4AP20338 ALOX12P2-203ENST00000570921 1945 ntBASIC12.5□□□□□ -0.41
RAB4AP20338 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RAB4AP20338 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB4AP20338 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB4AP20338 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RAB4AP20338 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RAB4AP20338 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB4AP20338 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB4AP20338 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB4AP20338 HLA-L-209ENST00000420110 1011 ntBASIC12.5□□□□□ -0.41
RAB4AP20338 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB4AP20338 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB4AP20338 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB4AP20338 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB4AP20338 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB4AP20338 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB4AP20338 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.5□□□□□ -0.41
RAB4AP20338 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB4AP20338 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms