Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC027612.4-201ENST00000605371 583 ntBASIC16.05■□□□□ 0.16
CAPN1P07384 AL355385.1-201ENST00000606123 409 ntBASIC16.05■□□□□ 0.16
CAPN1P07384 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN1P07384 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CAPN1P07384 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.04■□□□□ 0.16
CAPN1P07384 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.04■□□□□ 0.16
CAPN1P07384 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CAPN1P07384 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CAPN1P07384 AC103702.1-201ENST00000548801 2630 ntBASIC16.04■□□□□ 0.16
CAPN1P07384 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.04■□□□□ 0.16
CAPN1P07384 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.04■□□□□ 0.16
CAPN1P07384 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.04■□□□□ 0.16
CAPN1P07384 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.04■□□□□ 0.16
CAPN1P07384 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CAPN1P07384 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CAPN1P07384 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.04■□□□□ 0.16
CAPN1P07384 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.04■□□□□ 0.16
CAPN1P07384 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.04■□□□□ 0.16
CAPN1P07384 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.04■□□□□ 0.16
CAPN1P07384 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.04■□□□□ 0.16
CAPN1P07384 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.04■□□□□ 0.16
CAPN1P07384 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.04■□□□□ 0.16
CAPN1P07384 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CAPN1P07384 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CAPN1P07384 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.04■□□□□ 0.16
CAPN1P07384 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN1P07384 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CAPN1P07384 AC012569.1-201ENST00000591191 1524 ntBASIC16.04■□□□□ 0.16
CAPN1P07384 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CAPN1P07384 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CAPN1P07384 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN1P07384 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CAPN1P07384 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
CAPN1P07384 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPN1P07384 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN1P07384 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN1P07384 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN1P07384 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CAPN1P07384 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CAPN1P07384 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.03■□□□□ 0.16
CAPN1P07384 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CAPN1P07384 AC020765.3-201ENST00000613051 740 ntBASIC16.03■□□□□ 0.16
CAPN1P07384 AL513210.1-201ENST00000629608 234 ntBASIC16.03■□□□□ 0.16
CAPN1P07384 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN1P07384 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CAPN1P07384 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN1P07384 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CAPN1P07384 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN1P07384 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN1P07384 AL603832.2-201ENST00000566195 2125 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms