Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.56□□□□□ -0.4
TRBV12-3P01733 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV12-3P01733 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV12-3P01733 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV12-3P01733 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 PCDHA1-201ENST00000378133 2726 ntBASIC12.55□□□□□ -0.4
TRBV12-3P01733 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 AL391005.1-201ENST00000623953 2435 ntBASIC12.55□□□□□ -0.4
TRBV12-3P01733 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 FAM220BP-201ENST00000377689 816 ntBASIC12.55□□□□□ -0.4
TRBV12-3P01733 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 METTL21AP1-201ENST00000438852 635 ntBASIC12.55□□□□□ -0.4
TRBV12-3P01733 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 AC093028.1-201ENST00000622998 982 ntBASIC12.55□□□□□ -0.4
TRBV12-3P01733 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.55□□□□□ -0.4
TRBV12-3P01733 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV12-3P01733 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 AC061975.2-201ENST00000581722 295 ntBASIC12.54□□□□□ -0.4
TRBV12-3P01733 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 KRT18P28-201ENST00000453838 1332 ntBASIC12.54□□□□□ -0.4
TRBV12-3P01733 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms