Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD4P01730 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD4P01730 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD4P01730 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.81■□□□□ 0.44
CD4P01730 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CD4P01730 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CD4P01730 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CD4P01730 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CD4P01730 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.81■□□□□ 0.44
CD4P01730 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CD4P01730 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CD4P01730 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.81■□□□□ 0.44
CD4P01730 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CD4P01730 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CD4P01730 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.81■□□□□ 0.44
CD4P01730 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CD4P01730 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CD4P01730 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.81■□□□□ 0.44
CD4P01730 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.81■□□□□ 0.44
CD4P01730 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.81■□□□□ 0.44
CD4P01730 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.81■□□□□ 0.44
CD4P01730 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.81■□□□□ 0.44
CD4P01730 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.81■□□□□ 0.44
CD4P01730 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.81■□□□□ 0.44
CD4P01730 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
CD4P01730 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.81■□□□□ 0.44
CD4P01730 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.81■□□□□ 0.44
CD4P01730 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CD4P01730 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.81■□□□□ 0.44
CD4P01730 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.81■□□□□ 0.44
CD4P01730 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.81■□□□□ 0.44
CD4P01730 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD4P01730 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.8■□□□□ 0.44
CD4P01730 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CD4P01730 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CD4P01730 AC012313.1-201ENST00000593393 3059 ntBASIC17.8■□□□□ 0.44
CD4P01730 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.8■□□□□ 0.44
CD4P01730 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 KRT43P-201ENST00000434019 910 ntBASIC17.8■□□□□ 0.44
CD4P01730 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.8■□□□□ 0.44
CD4P01730 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.8■□□□□ 0.44
CD4P01730 AL583810.1-201ENST00000553344 1045 ntBASIC17.8■□□□□ 0.44
CD4P01730 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.8■□□□□ 0.44
CD4P01730 AC233724.13-201ENST00000598383 410 ntBASIC17.8■□□□□ 0.44
CD4P01730 AC084346.2-201ENST00000607097 949 ntBASIC17.8■□□□□ 0.44
CD4P01730 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CD4P01730 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.8■□□□□ 0.44
CD4P01730 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 AL136982.4-201ENST00000437689 1740 ntBASIC17.8■□□□□ 0.44
CD4P01730 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.8■□□□□ 0.44
CD4P01730 GGT4P-201ENST00000623672 1708 ntBASIC17.8■□□□□ 0.44
CD4P01730 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.8■□□□□ 0.44
CD4P01730 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.8■□□□□ 0.44
CD4P01730 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD4P01730 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CD4P01730 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CD4P01730 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CD4P01730 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CD4P01730 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.79■□□□□ 0.44
CD4P01730 AC018665.1-201ENST00000622927 1362 ntBASIC17.79■□□□□ 0.44
CD4P01730 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD4P01730 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD4P01730 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD4P01730 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.79■□□□□ 0.44
CD4P01730 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD4P01730 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD4P01730 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD4P01730 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms