Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 STRCP1-201ENST00000509801 5328 ntBASIC12.9□□□□□ -0.34
IFNA1P01562 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.9□□□□□ -0.34
IFNA1P01562 AL512652.2-201ENST00000625156 1716 ntBASIC12.9□□□□□ -0.34
IFNA1P01562 AC232323.1-201ENST00000540724 2099 ntBASIC12.9□□□□□ -0.34
IFNA1P01562 REXO1L5P-201ENST00000622260 2098 ntBASIC12.9□□□□□ -0.34
IFNA1P01562 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
IFNA1P01562 AC139749.1-202ENST00000617529 3139 ntBASIC12.9□□□□□ -0.34
IFNA1P01562 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.9□□□□□ -0.34
IFNA1P01562 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IFNA1P01562 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
IFNA1P01562 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
IFNA1P01562 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
IFNA1P01562 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.35
IFNA1P01562 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
IFNA1P01562 CICP23-201ENST00000605013 2741 ntBASIC12.9□□□□□ -0.35
IFNA1P01562 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 KRT8P39-201ENST00000396270 1433 ntBASIC12.89□□□□□ -0.35
IFNA1P01562 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.89□□□□□ -0.35
IFNA1P01562 AP003680.1-201ENST00000598970 3660 ntBASIC12.89□□□□□ -0.35
IFNA1P01562 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.89□□□□□ -0.35
IFNA1P01562 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.89□□□□□ -0.35
IFNA1P01562 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 TSPY14P-201ENST00000303979 915 ntBASIC12.89□□□□□ -0.35
IFNA1P01562 ABHD17AP1-201ENST00000358206 933 ntBASIC12.89□□□□□ -0.35
IFNA1P01562 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.89□□□□□ -0.35
IFNA1P01562 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 ZNF444P1-201ENST00000559497 298 ntBASIC12.89□□□□□ -0.35
IFNA1P01562 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.89□□□□□ -0.35
IFNA1P01562 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.89□□□□□ -0.35
IFNA1P01562 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
IFNA1P01562 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
IFNA1P01562 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.89□□□□□ -0.35
IFNA1P01562 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
IFNA1P01562 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
IFNA1P01562 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.89□□□□□ -0.35
IFNA1P01562 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.89□□□□□ -0.35
IFNA1P01562 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
IFNA1P01562 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
IFNA1P01562 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.88□□□□□ -0.35
IFNA1P01562 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.88□□□□□ -0.35
IFNA1P01562 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
IFNA1P01562 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
IFNA1P01562 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
IFNA1P01562 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
IFNA1P01562 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.88□□□□□ -0.35
IFNA1P01562 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.88□□□□□ -0.35
IFNA1P01562 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.88□□□□□ -0.35
IFNA1P01562 EGLN1P1-201ENST00000531623 762 ntBASIC12.88□□□□□ -0.35
IFNA1P01562 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.88□□□□□ -0.35
IFNA1P01562 FITM1-202ENST00000559294 800 ntBASIC12.88□□□□□ -0.35
IFNA1P01562 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.88□□□□□ -0.35
IFNA1P01562 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.88□□□□□ -0.35
IFNA1P01562 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms