Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AL512356.2-201ENST00000546955 174 ntBASIC17.18■□□□□ 0.34
ZBED1O96006 RARRES2P9-201ENST00000565168 469 ntBASIC17.18■□□□□ 0.34
ZBED1O96006 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 AC093028.1-201ENST00000622998 982 ntBASIC17.18■□□□□ 0.34
ZBED1O96006 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ZBED1O96006 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.18■□□□□ 0.34
ZBED1O96006 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
ZBED1O96006 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.18■□□□□ 0.34
ZBED1O96006 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.18■□□□□ 0.34
ZBED1O96006 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ZBED1O96006 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.18■□□□□ 0.34
ZBED1O96006 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ZBED1O96006 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ZBED1O96006 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.18■□□□□ 0.34
ZBED1O96006 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.17■□□□□ 0.34
ZBED1O96006 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.17■□□□□ 0.34
ZBED1O96006 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ZBED1O96006 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.17■□□□□ 0.34
ZBED1O96006 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZBED1O96006 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.17■□□□□ 0.34
ZBED1O96006 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.17■□□□□ 0.34
ZBED1O96006 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZBED1O96006 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZBED1O96006 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.17■□□□□ 0.34
ZBED1O96006 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZBED1O96006 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZBED1O96006 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.17■□□□□ 0.34
ZBED1O96006 FAM220BP-201ENST00000377689 816 ntBASIC17.17■□□□□ 0.34
ZBED1O96006 HLA-H-201ENST00000383620 1096 ntBASIC17.17■□□□□ 0.34
ZBED1O96006 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.17■□□□□ 0.34
ZBED1O96006 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
ZBED1O96006 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.17■□□□□ 0.34
ZBED1O96006 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZBED1O96006 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZBED1O96006 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.17■□□□□ 0.34
ZBED1O96006 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.17■□□□□ 0.34
ZBED1O96006 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.17■□□□□ 0.34
ZBED1O96006 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.17■□□□□ 0.34
ZBED1O96006 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.17■□□□□ 0.34
ZBED1O96006 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZBED1O96006 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.17■□□□□ 0.34
ZBED1O96006 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZBED1O96006 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ZBED1O96006 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.17■□□□□ 0.34
ZBED1O96006 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
ZBED1O96006 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.17■□□□□ 0.34
ZBED1O96006 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ZBED1O96006 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZBED1O96006 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZBED1O96006 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZBED1O96006 AL513523.2-202ENST00000427283 2040 ntBASIC17.16■□□□□ 0.34
ZBED1O96006 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZBED1O96006 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZBED1O96006 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZBED1O96006 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.16■□□□□ 0.34
ZBED1O96006 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZBED1O96006 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZBED1O96006 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZBED1O96006 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ZBED1O96006 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
ZBED1O96006 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZBED1O96006 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZBED1O96006 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.16■□□□□ 0.34
ZBED1O96006 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.16■□□□□ 0.34
ZBED1O96006 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZBED1O96006 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.16■□□□□ 0.34
ZBED1O96006 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZBED1O96006 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZBED1O96006 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZBED1O96006 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZBED1O96006 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZBED1O96006 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
ZBED1O96006 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.16■□□□□ 0.34
ZBED1O96006 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZBED1O96006 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.16■□□□□ 0.34
ZBED1O96006 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.16■□□□□ 0.34
ZBED1O96006 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZBED1O96006 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ZBED1O96006 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.16■□□□□ 0.34
ZBED1O96006 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.15■□□□□ 0.34
ZBED1O96006 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ZBED1O96006 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZBED1O96006 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZBED1O96006 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.15■□□□□ 0.34
ZBED1O96006 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZBED1O96006 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZBED1O96006 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
ZBED1O96006 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms