Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.49□□□□□ -0.09
PFDN1O60925 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PFDN1O60925 SUDS3P1-201ENST00000505831 966 ntBASIC14.49□□□□□ -0.09
PFDN1O60925 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.49□□□□□ -0.09
PFDN1O60925 AC142381.2-201ENST00000566120 298 ntBASIC14.49□□□□□ -0.09
PFDN1O60925 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 AC110285.6-201ENST00000617652 491 ntBASIC14.49□□□□□ -0.09
PFDN1O60925 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.49□□□□□ -0.09
PFDN1O60925 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.49□□□□□ -0.09
PFDN1O60925 AC092135.3-201ENST00000624151 1846 ntBASIC14.49□□□□□ -0.09
PFDN1O60925 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PFDN1O60925 STRCP1-201ENST00000509801 5328 ntBASIC14.49□□□□□ -0.09
PFDN1O60925 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PFDN1O60925 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.49□□□□□ -0.09
PFDN1O60925 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
PFDN1O60925 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
PFDN1O60925 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PFDN1O60925 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PFDN1O60925 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PFDN1O60925 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.49□□□□□ -0.09
PFDN1O60925 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.49□□□□□ -0.09
PFDN1O60925 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.49□□□□□ -0.09
PFDN1O60925 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC14.48□□□□□ -0.09
PFDN1O60925 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC14.48□□□□□ -0.09
PFDN1O60925 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
PFDN1O60925 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PFDN1O60925 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 USO1-201ENST00000264904 4135 ntTSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
PFDN1O60925 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.48□□□□□ -0.09
PFDN1O60925 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PFDN1O60925 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.48□□□□□ -0.09
PFDN1O60925 OR10C1-204ENST00000622521 1039 ntBASIC14.48□□□□□ -0.09
PFDN1O60925 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.48□□□□□ -0.09
PFDN1O60925 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PFDN1O60925 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.48□□□□□ -0.09
PFDN1O60925 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PFDN1O60925 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PFDN1O60925 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PFDN1O60925 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PFDN1O60925 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PFDN1O60925 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PFDN1O60925 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PFDN1O60925 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
PFDN1O60925 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PFDN1O60925 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PFDN1O60925 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.47□□□□□ -0.09
PFDN1O60925 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.47□□□□□ -0.09
PFDN1O60925 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms