Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPBD1B2RD01 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.89□□□□□ -0.03
CENPBD1B2RD01 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.89□□□□□ -0.03
CENPBD1B2RD01 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPBD1B2RD01 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPBD1B2RD01 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CENPBD1B2RD01 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.89□□□□□ -0.03
CENPBD1B2RD01 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 NORAD-201ENST00000565493 5339 ntBASIC14.88□□□□□ -0.03
CENPBD1B2RD01 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 SLC22A20-204ENST00000530038 1673 ntBASIC14.88□□□□□ -0.03
CENPBD1B2RD01 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 AC098831.1-202ENST00000438821 336 ntBASIC14.88□□□□□ -0.03
CENPBD1B2RD01 AC108751.1-201ENST00000490852 363 ntBASIC14.88□□□□□ -0.03
CENPBD1B2RD01 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 OR7E47P-204ENST00000575924 449 ntBASIC14.88□□□□□ -0.03
CENPBD1B2RD01 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 AC004790.2-201ENST00000623588 572 ntBASIC14.88□□□□□ -0.03
CENPBD1B2RD01 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 AC026748.1-201ENST00000624349 3251 ntBASIC14.88□□□□□ -0.03
CENPBD1B2RD01 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 SNX33P1-201ENST00000592116 1762 ntBASIC14.88□□□□□ -0.03
CENPBD1B2RD01 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CENPBD1B2RD01 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 MRPL3P1-201ENST00000400109 1033 ntBASIC14.87□□□□□ -0.03
CENPBD1B2RD01 PMS2P1-201ENST00000431037 1228 ntBASIC14.87□□□□□ -0.03
CENPBD1B2RD01 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 MIR3909-201ENST00000579518 119 ntBASIC14.87□□□□□ -0.03
CENPBD1B2RD01 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 AC116407.3-201ENST00000623905 1129 ntBASIC14.87□□□□□ -0.03
CENPBD1B2RD01 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPBD1B2RD01 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms