Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RCCD1A6NED2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.27■□□□□ 0.36
RCCD1A6NED2 FAM197Y8-203ENST00000450145 560 ntBASIC17.27■□□□□ 0.36
RCCD1A6NED2 AP002469.2-201ENST00000531724 424 ntBASIC17.27■□□□□ 0.36
RCCD1A6NED2 AL031432.2-201ENST00000566714 459 ntBASIC17.27■□□□□ 0.36
RCCD1A6NED2 AL928711.1-201ENST00000570165 459 ntBASIC17.27■□□□□ 0.36
RCCD1A6NED2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.27■□□□□ 0.36
RCCD1A6NED2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RCCD1A6NED2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RCCD1A6NED2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.27■□□□□ 0.36
RCCD1A6NED2 AC112693.3-201ENST00000624819 1983 ntBASIC17.27■□□□□ 0.36
RCCD1A6NED2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RCCD1A6NED2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RCCD1A6NED2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.27■□□□□ 0.35
RCCD1A6NED2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RCCD1A6NED2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.35
RCCD1A6NED2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.27■□□□□ 0.35
RCCD1A6NED2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.27■□□□□ 0.35
RCCD1A6NED2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RCCD1A6NED2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RCCD1A6NED2 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
RCCD1A6NED2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RCCD1A6NED2 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RCCD1A6NED2 AC134407.2-201ENST00000625089 1978 ntBASIC17.26■□□□□ 0.35
RCCD1A6NED2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RCCD1A6NED2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 AL513480.1-201ENST00000451731 511 ntBASIC17.26■□□□□ 0.35
RCCD1A6NED2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RCCD1A6NED2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RCCD1A6NED2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RCCD1A6NED2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RCCD1A6NED2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.26■□□□□ 0.35
RCCD1A6NED2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 AP001002.2-201ENST00000625137 386 ntBASIC17.25■□□□□ 0.35
RCCD1A6NED2 AL645728.2-201ENST00000641974 660 ntBASIC17.25■□□□□ 0.35
RCCD1A6NED2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.25■□□□□ 0.35
RCCD1A6NED2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RCCD1A6NED2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.24■□□□□ 0.35
RCCD1A6NED2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.24■□□□□ 0.35
RCCD1A6NED2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.24■□□□□ 0.35
RCCD1A6NED2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.24■□□□□ 0.35
RCCD1A6NED2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RCCD1A6NED2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.24■□□□□ 0.35
RCCD1A6NED2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms