Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.66■■□□□ 1.06
SBNO1A3KN83 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC21.66■■□□□ 1.06
SBNO1A3KN83 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SBNO1A3KN83 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
SBNO1A3KN83 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SBNO1A3KN83 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SBNO1A3KN83 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC21.66■■□□□ 1.06
SBNO1A3KN83 AC000095.1-201ENST00000603208 874 ntBASIC21.66■■□□□ 1.06
SBNO1A3KN83 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC21.66■■□□□ 1.06
SBNO1A3KN83 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC21.66■■□□□ 1.06
SBNO1A3KN83 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC21.66■■□□□ 1.06
SBNO1A3KN83 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SBNO1A3KN83 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SBNO1A3KN83 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
SBNO1A3KN83 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SBNO1A3KN83 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SBNO1A3KN83 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SBNO1A3KN83 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SBNO1A3KN83 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.66■■□□□ 1.06
SBNO1A3KN83 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.66■■□□□ 1.06
SBNO1A3KN83 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SBNO1A3KN83 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SBNO1A3KN83 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SBNO1A3KN83 POU5F1P6-201ENST00000466990 990 ntBASIC21.65■■□□□ 1.06
SBNO1A3KN83 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 AC022137.2-201ENST00000503482 481 ntBASIC21.65■■□□□ 1.06
SBNO1A3KN83 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SBNO1A3KN83 AC091271.1-201ENST00000611877 1162 ntBASIC21.65■■□□□ 1.06
SBNO1A3KN83 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SBNO1A3KN83 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 AGER-206ENST00000375070 1463 ntTSL 5 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SBNO1A3KN83 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SBNO1A3KN83 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SBNO1A3KN83 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SBNO1A3KN83 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SBNO1A3KN83 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SBNO1A3KN83 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.65■■□□□ 1.06
SBNO1A3KN83 LETM1P2-201ENST00000597330 2178 ntBASIC21.65■■□□□ 1.06
SBNO1A3KN83 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SBNO1A3KN83 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SBNO1A3KN83 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.64■■□□□ 1.06
SBNO1A3KN83 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SBNO1A3KN83 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
SBNO1A3KN83 CALR4P-201ENST00000431943 946 ntBASIC21.64■■□□□ 1.06
SBNO1A3KN83 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC21.64■■□□□ 1.06
SBNO1A3KN83 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC21.64■■□□□ 1.06
SBNO1A3KN83 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC21.64■■□□□ 1.06
SBNO1A3KN83 RPL8-205ENST00000527914 551 ntTSL 3 BASIC21.64■■□□□ 1.06
SBNO1A3KN83 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SBNO1A3KN83 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC21.64■■□□□ 1.06
SBNO1A3KN83 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.64■■□□□ 1.06
SBNO1A3KN83 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC21.64■■□□□ 1.06
SBNO1A3KN83 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
SBNO1A3KN83 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SBNO1A3KN83 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC21.64■■□□□ 1.05
SBNO1A3KN83 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC21.64■■□□□ 1.05
SBNO1A3KN83 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SBNO1A3KN83 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SBNO1A3KN83 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SBNO1A3KN83 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SBNO1A3KN83 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SBNO1A3KN83 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SBNO1A3KN83 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SBNO1A3KN83 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SBNO1A3KN83 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SBNO1A3KN83 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SBNO1A3KN83 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SBNO1A3KN83 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SBNO1A3KN83 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SBNO1A3KN83 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SBNO1A3KN83 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SBNO1A3KN83 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 AC106872.11-201ENST00000605838 421 ntBASIC21.63■■□□□ 1.05
SBNO1A3KN83 LARP4-220ENST00000615080 856 ntTSL 5 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 ABBA01031663.1-201ENST00000635630 790 ntBASIC21.63■■□□□ 1.05
SBNO1A3KN83 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms