Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 REXO1L8P-201ENST00000604378 1897 ntBASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 RNF216P1-203ENST00000404404 2427 ntBASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.35■□□□□ 0.85
LOC102724428A0A0B4J2F2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC091271.1-201ENST00000611877 1162 ntBASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 UBALD1-205ENST00000590891 2641 ntBASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC078925.2-201ENST00000624013 1973 ntBASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC20.34■□□□□ 0.85
LOC102724428A0A0B4J2F2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms