Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCH2Q9Y6C5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCH2Q9Y6C5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCH2Q9Y6C5 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCH2Q9Y6C5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.13■□□□□ 0.49
PTCH2Q9Y6C5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
PTCH2Q9Y6C5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PTCH2Q9Y6C5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTCH2Q9Y6C5 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCH2Q9Y6C5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 GPAA1P2-202ENST00000606848 1787 ntBASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 AC092053.1-201ENST00000605787 1936 ntBASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 AL662890.1-201ENST00000396818 632 ntBASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 UPF3AP2-201ENST00000457924 1132 ntBASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 RPL13AP25-201ENST00000484130 612 ntBASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 SCARNA20.5-201ENST00000516991 142 ntBASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 AC023310.1-201ENST00000554836 735 ntBASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 AC005252.2-201ENST00000624630 1141 ntBASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCH2Q9Y6C5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 AC074338.1-201ENST00000416825 156 ntBASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 FNTAP2-201ENST00000430308 634 ntBASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 AL591846.1-201ENST00000451736 433 ntBASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 AP001063.1-201ENST00000568332 529 ntBASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 AC005695.3-201ENST00000614522 232 ntBASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCH2Q9Y6C5 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms