Protein–RNA interactions for Protein: Q9Y4B5

MTCL1, Microtubule cross-linking factor 1, humanhuman

Known RBP Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1Q9Y4B5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.63■□□□□ 0.25
MTCL1Q9Y4B5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MTCL1Q9Y4B5 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MTCL1Q9Y4B5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTCL1Q9Y4B5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTCL1Q9Y4B5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTCL1Q9Y4B5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.63■□□□□ 0.25
MTCL1Q9Y4B5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 AC079316.1-201ENST00000548397 411 ntBASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 ACTG1P3-201ENST00000431775 1114 ntBASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 KRT43P-201ENST00000434019 910 ntBASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 AC108725.1-201ENST00000495472 409 ntBASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
MTCL1Q9Y4B5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 BAATP1-201ENST00000412284 1225 ntBASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 AC093433.1-201ENST00000458048 571 ntBASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 AC000095.1-201ENST00000603208 874 ntBASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 RHOXF1P1-202ENST00000635473 501 ntBASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MTCL1Q9Y4B5 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 MIR1908-201ENST00000410394 80 ntBASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.6■□□□□ 0.25
MTCL1Q9Y4B5 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms