Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 AC002347.1-201ENST00000569543 541 ntBASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 AC068137.2-201ENST00000605408 478 ntBASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 AL513190.1-201ENST00000621254 727 ntBASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 GPAA1P2-202ENST00000606848 1787 ntBASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 AC004832.2-201ENST00000426397 482 ntBASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 POLD2P1-201ENST00000511220 997 ntBASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 AL671883.3-201ENST00000603274 991 ntBASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 AL161645.1-201ENST00000622716 1255 ntBASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAPPC4Q9Y296 GGT3P-204ENST00000453783 1664 ntBASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 GGT4P-201ENST00000623672 1708 ntBASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms