Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PDZRN3Q9UPQ7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PDZRN3Q9UPQ7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC20.93■□□□□ 0.94
PDZRN3Q9UPQ7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDZRN3Q9UPQ7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDZRN3Q9UPQ7 GGT3P-204ENST00000453783 1664 ntBASIC20.93■□□□□ 0.94
PDZRN3Q9UPQ7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 RARRES2P9-201ENST00000565168 469 ntBASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDZRN3Q9UPQ7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 AC132872.4-202ENST00000622924 2756 ntBASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 AC142381.1-201ENST00000426099 345 ntBASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 AC073389.1-201ENST00000595595 795 ntBASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 AL162727.3-201ENST00000635661 2787 ntBASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDZRN3Q9UPQ7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 MTHFR-217ENST00000641820 1569 ntBASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 MPDU1-223ENST00000582151 728 ntBASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDZRN3Q9UPQ7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms