Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 AC010969.2-201ENST00000602458 3231 ntBASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
CDC42SE1Q9NRR8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 AC087633.2-202ENST00000565166 1439 ntBASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 OR2I1P-208ENST00000641137 4948 ntBASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 UBTFL8-201ENST00000426903 2112 ntBASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 AC116407.2-201ENST00000613639 860 ntBASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 SUPT20HL1-201ENST00000436466 2618 ntBASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms