Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 RPS8P6-201ENST00000426177 609 ntBASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 AP000344.2-201ENST00000512987 629 ntBASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 AC093520.2-201ENST00000561830 333 ntBASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCSER1Q9C0I3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 AL627223.1-201ENST00000416693 442 ntBASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 FAM58DP-201ENST00000428076 619 ntBASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 AC243562.2-201ENST00000561247 970 ntBASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 RARRES2P9-201ENST00000565168 469 ntBASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCSER1Q9C0I3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 PAUPAR-201ENST00000630360 2965 ntBASIC18.11■□□□□ 0.49
CCSER1Q9C0I3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms