Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC11.39□□□□□ -0.59
UPK3BQ9BT76 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC11.39□□□□□ -0.59
UPK3BQ9BT76 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 LINC02199-201ENST00000506655 2702 ntBASIC11.38□□□□□ -0.59
UPK3BQ9BT76 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 KRT18P32-201ENST00000424695 1287 ntBASIC11.38□□□□□ -0.59
UPK3BQ9BT76 AL645939.2-201ENST00000427340 991 ntBASIC11.38□□□□□ -0.59
UPK3BQ9BT76 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 AC069335.1-201ENST00000489972 472 ntBASIC11.38□□□□□ -0.59
UPK3BQ9BT76 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 LINC01225-203ENST00000563550 1244 ntBASIC11.38□□□□□ -0.59
UPK3BQ9BT76 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 AC016027.1-202ENST00000607927 1699 ntBASIC11.38□□□□□ -0.59
UPK3BQ9BT76 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.38□□□□□ -0.59
UPK3BQ9BT76 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 AC105233.2-201ENST00000523697 349 ntBASIC11.37□□□□□ -0.59
UPK3BQ9BT76 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms