Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 FAM58CP-201ENST00000435741 640 ntBASIC15.15■□□□□ 0.02
TM9SF2Q99805 AC112191.1-201ENST00000523689 701 ntBASIC15.15■□□□□ 0.02
TM9SF2Q99805 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.14■□□□□ 0.01
TM9SF2Q99805 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 AC005412.3-201ENST00000580309 715 ntBASIC15.14■□□□□ 0.01
TM9SF2Q99805 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
TM9SF2Q99805 AC092384.3-202ENST00000564646 2873 ntBASIC15.14■□□□□ 0.01
TM9SF2Q99805 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF2Q99805 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF2Q99805 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF2Q99805 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF2Q99805 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF2Q99805 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF2Q99805 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF2Q99805 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF2Q99805 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms