Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 LINC01144-201ENST00000626198 1710 ntBASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 AC104109.2-201ENST00000602919 1418 ntBASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 KRT18P27-201ENST00000427733 1299 ntBASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 AC136632.2-201ENST00000512891 861 ntBASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 RNA5SP415-201ENST00000517246 115 ntBASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 AC023157.3-201ENST00000619086 2088 ntBASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 AL031731.1-201ENST00000642131 2094 ntBASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40AQ8WXH6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 AL512652.2-201ENST00000625156 1716 ntBASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 MIR648-201ENST00000385046 94 ntBASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 Z83851.2-201ENST00000609564 659 ntBASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 AC117500.6-201ENST00000624871 588 ntBASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 AC126755.1-201ENST00000525846 6405 ntBASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms