Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 AC018712.1-201ENST00000455767 687 ntBASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 PRSS29P-201ENST00000440800 595 ntBASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 IFNL4P1-201ENST00000607083 540 ntBASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 AL365330.1-201ENST00000607459 531 ntBASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 TP73-AS1-207ENST00000624167 988 ntBASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC44A1Q8WWI5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms