Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 AC005622.1-201ENST00000636801 1703 ntBASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 MAGEA5-201ENST00000446757 942 ntBASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 AC020916.1-201ENST00000587762 1774 ntBASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 PFN2-202ENST00000423691 911 ntTSL 2 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 AC097359.3-201ENST00000603982 1210 ntBASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 PP12613-201ENST00000424958 2230 ntBASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
ALMS1Q8TCU4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 BAATP1-201ENST00000412284 1225 ntBASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 AC022217.1-201ENST00000521069 738 ntBASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 AP003171.2-201ENST00000528208 925 ntBASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 AC134698.3-201ENST00000523880 214 ntBASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms