Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 AC092474.2-201ENST00000424288 719 ntBASIC16.75■□□□□ 0.27
PAF1Q8N7H5 HLA-J-202ENST00000469281 1241 ntBASIC16.75■□□□□ 0.27
PAF1Q8N7H5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 AC006538.3-201ENST00000612495 578 ntBASIC16.75■□□□□ 0.27
PAF1Q8N7H5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 AL139384.1-201ENST00000612143 3047 ntBASIC16.75■□□□□ 0.27
PAF1Q8N7H5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 HLA-A-202ENST00000376806 1854 ntBASIC16.74■□□□□ 0.27
PAF1Q8N7H5 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 AC099522.2-201ENST00000607001 744 ntBASIC16.74■□□□□ 0.27
PAF1Q8N7H5 AC020765.3-201ENST00000613051 740 ntBASIC16.74■□□□□ 0.27
PAF1Q8N7H5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 UXT-AS1-201ENST00000590504 1525 ntBASIC16.74■□□□□ 0.27
PAF1Q8N7H5 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAF1Q8N7H5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms