Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 AP005117.1-202ENST00000581724 1908 ntBASIC13.15□□□□□ -0.3
LINC00311Q8N616 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00311Q8N616 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00311Q8N616 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00311Q8N616 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.15□□□□□ -0.31
LINC00311Q8N616 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 AC254562.1-201ENST00000417586 456 ntBASIC13.14□□□□□ -0.31
LINC00311Q8N616 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 KRT18P32-201ENST00000424695 1287 ntBASIC13.14□□□□□ -0.31
LINC00311Q8N616 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 AC010491.1-201ENST00000563101 2797 ntBASIC13.14□□□□□ -0.31
LINC00311Q8N616 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00311Q8N616 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00311Q8N616 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LINC00311Q8N616 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LINC00311Q8N616 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.13□□□□□ -0.31
LINC00311Q8N616 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LINC00311Q8N616 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00311Q8N616 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00311Q8N616 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00311Q8N616 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
LINC00311Q8N616 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00311Q8N616 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00311Q8N616 AP006288.1-201ENST00000446065 395 ntBASIC13.13□□□□□ -0.31
LINC00311Q8N616 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.13□□□□□ -0.31
LINC00311Q8N616 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00311Q8N616 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00311Q8N616 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.13□□□□□ -0.31
LINC00311Q8N616 ALG1L8P-201ENST00000533887 760 ntBASIC13.13□□□□□ -0.31
LINC00311Q8N616 AC092865.5-201ENST00000545435 363 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms