Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC83Q8IWF9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC83Q8IWF9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC83Q8IWF9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC83Q8IWF9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC83Q8IWF9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC83Q8IWF9 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC83Q8IWF9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 DBET-201ENST00000630918 3363 ntBASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 IL9RP2-201ENST00000423948 1312 ntBASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 AL121894.2-201ENST00000602977 491 ntBASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 AL513190.1-201ENST00000621254 727 ntBASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC83Q8IWF9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 AC073347.1-201ENST00000421633 2643 ntBASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC83Q8IWF9 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.08■□□□□ 0.65
CCDC83Q8IWF9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC83Q8IWF9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC83Q8IWF9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CCDC83Q8IWF9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms