Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 PMS2P2-201ENST00000425039 1128 ntBASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 AC142381.1-201ENST00000426099 345 ntBASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TTC39BQ5VTQ0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TTC39BQ5VTQ0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TTC39BQ5VTQ0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TTC39BQ5VTQ0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
TTC39BQ5VTQ0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TTC39BQ5VTQ0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.96■□□□□ 0.3
TTC39BQ5VTQ0 LINC01144-201ENST00000626198 1710 ntBASIC16.96■□□□□ 0.3
TTC39BQ5VTQ0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 PCGF3-213ENST00000620529 1899 ntBASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 AC025678.2-201ENST00000562061 970 ntBASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 AL138918.1-201ENST00000568306 659 ntBASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 LINC00628-201ENST00000628516 1289 ntBASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TTC39BQ5VTQ0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 AC132872.4-202ENST00000622924 2756 ntBASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 AC005052.1-201ENST00000625181 2492 ntBASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 FAM58DP-201ENST00000428076 619 ntBASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 SLC25A39P2-201ENST00000537614 270 ntBASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 AL512356.2-201ENST00000546955 174 ntBASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 AP001059.3-201ENST00000619053 235 ntBASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms