Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
IRX4P78413 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
IRX4P78413 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
IRX4P78413 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX4P78413 ALOX12P2-203ENST00000570921 1945 ntBASIC17■□□□□ 0.31
IRX4P78413 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.99■□□□□ 0.31
IRX4P78413 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.99■□□□□ 0.31
IRX4P78413 HLA-A-202ENST00000376806 1854 ntBASIC16.99■□□□□ 0.31
IRX4P78413 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.99■□□□□ 0.31
IRX4P78413 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 AL645728.1-201ENST00000366221 2101 ntBASIC16.99■□□□□ 0.31
IRX4P78413 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
IRX4P78413 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
IRX4P78413 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 AC236430.1-201ENST00000402231 743 ntBASIC16.99■□□□□ 0.31
IRX4P78413 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.99■□□□□ 0.31
IRX4P78413 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.99■□□□□ 0.31
IRX4P78413 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.99■□□□□ 0.31
IRX4P78413 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.99■□□□□ 0.31
IRX4P78413 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
IRX4P78413 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
IRX4P78413 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.99■□□□□ 0.31
IRX4P78413 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
IRX4P78413 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
IRX4P78413 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.98■□□□□ 0.31
IRX4P78413 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.98■□□□□ 0.31
IRX4P78413 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.98■□□□□ 0.31
IRX4P78413 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
IRX4P78413 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
IRX4P78413 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.98■□□□□ 0.31
IRX4P78413 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.98■□□□□ 0.31
IRX4P78413 BASP1P1-201ENST00000430708 665 ntBASIC16.98■□□□□ 0.31
IRX4P78413 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
IRX4P78413 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.98■□□□□ 0.31
IRX4P78413 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.98■□□□□ 0.31
IRX4P78413 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.98■□□□□ 0.31
IRX4P78413 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.98■□□□□ 0.31
IRX4P78413 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 AL391256.1-201ENST00000443260 1855 ntBASIC16.98■□□□□ 0.31
IRX4P78413 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.98■□□□□ 0.31
IRX4P78413 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
IRX4P78413 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
IRX4P78413 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
IRX4P78413 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
IRX4P78413 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.97■□□□□ 0.31
IRX4P78413 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.97■□□□□ 0.31
IRX4P78413 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
IRX4P78413 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms