Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
UBE2D3P61077 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.63□□□□□ -0.55
UBE2D3P61077 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.63□□□□□ -0.55
UBE2D3P61077 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.63□□□□□ -0.55
UBE2D3P61077 MRPL20P1-201ENST00000400819 433 ntBASIC11.63□□□□□ -0.55
UBE2D3P61077 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.63□□□□□ -0.55
UBE2D3P61077 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.63□□□□□ -0.55
UBE2D3P61077 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.63□□□□□ -0.55
UBE2D3P61077 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.63□□□□□ -0.55
UBE2D3P61077 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.63□□□□□ -0.55
UBE2D3P61077 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
UBE2D3P61077 AL356488.2-201ENST00000602755 427 ntBASIC11.63□□□□□ -0.55
UBE2D3P61077 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 AC005593.1-201ENST00000624894 515 ntBASIC11.63□□□□□ -0.55
UBE2D3P61077 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
UBE2D3P61077 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
UBE2D3P61077 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.63□□□□□ -0.55
UBE2D3P61077 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.63□□□□□ -0.55
UBE2D3P61077 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
UBE2D3P61077 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
UBE2D3P61077 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.63□□□□□ -0.55
UBE2D3P61077 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC11.63□□□□□ -0.55
UBE2D3P61077 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
UBE2D3P61077 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
UBE2D3P61077 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.63□□□□□ -0.55
UBE2D3P61077 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC11.63□□□□□ -0.55
UBE2D3P61077 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.62□□□□□ -0.55
UBE2D3P61077 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.62□□□□□ -0.55
UBE2D3P61077 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
UBE2D3P61077 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.62□□□□□ -0.55
UBE2D3P61077 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.62□□□□□ -0.55
UBE2D3P61077 AC012569.1-201ENST00000591191 1524 ntBASIC11.62□□□□□ -0.55
UBE2D3P61077 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.62□□□□□ -0.55
UBE2D3P61077 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
UBE2D3P61077 RPS2P28-201ENST00000314255 741 ntBASIC11.62□□□□□ -0.55
UBE2D3P61077 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.62□□□□□ -0.55
UBE2D3P61077 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
UBE2D3P61077 AF186996.4-201ENST00000467186 377 ntBASIC11.62□□□□□ -0.55
UBE2D3P61077 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC11.62□□□□□ -0.55
UBE2D3P61077 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC11.62□□□□□ -0.55
UBE2D3P61077 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.62□□□□□ -0.55
UBE2D3P61077 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.62□□□□□ -0.55
UBE2D3P61077 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.62□□□□□ -0.55
UBE2D3P61077 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.62□□□□□ -0.55
UBE2D3P61077 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.62□□□□□ -0.55
UBE2D3P61077 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
UBE2D3P61077 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.62□□□□□ -0.55
UBE2D3P61077 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
UBE2D3P61077 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2D3P61077 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.62□□□□□ -0.55
UBE2D3P61077 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
UBE2D3P61077 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D3P61077 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D3P61077 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D3P61077 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D3P61077 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D3P61077 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D3P61077 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
UBE2D3P61077 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D3P61077 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
UBE2D3P61077 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D3P61077 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC11.61□□□□□ -0.55
UBE2D3P61077 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.61□□□□□ -0.55
UBE2D3P61077 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D3P61077 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D3P61077 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms