Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 ANO7L1-203ENST00000602586 1720 ntBASIC13.53□□□□□ -0.24
RIPPLY3P57055 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RIPPLY3P57055 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RIPPLY3P57055 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RIPPLY3P57055 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RIPPLY3P57055 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.52□□□□□ -0.24
RIPPLY3P57055 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
RIPPLY3P57055 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RIPPLY3P57055 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RIPPLY3P57055 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RIPPLY3P57055 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.52□□□□□ -0.25
RIPPLY3P57055 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 HMGA1P7-201ENST00000406908 502 ntBASIC13.52□□□□□ -0.25
RIPPLY3P57055 AC026954.1-201ENST00000429771 1293 ntBASIC13.52□□□□□ -0.25
RIPPLY3P57055 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 AC087163.2-201ENST00000457299 853 ntBASIC13.52□□□□□ -0.25
RIPPLY3P57055 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 SRD5A3P1-201ENST00000603021 949 ntBASIC13.52□□□□□ -0.25
RIPPLY3P57055 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RIPPLY3P57055 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIPPLY3P57055 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIPPLY3P57055 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIPPLY3P57055 TSPY26P-202ENST00000565928 3884 ntBASIC13.51□□□□□ -0.25
RIPPLY3P57055 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RIPPLY3P57055 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIPPLY3P57055 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIPPLY3P57055 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIPPLY3P57055 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIPPLY3P57055 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RIPPLY3P57055 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RIPPLY3P57055 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIPPLY3P57055 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 AC009336.1-201ENST00000608941 1553 ntBASIC13.51□□□□□ -0.25
RIPPLY3P57055 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIPPLY3P57055 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RIPPLY3P57055 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RIPPLY3P57055 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 AP000812.2-201ENST00000538934 718 ntBASIC13.51□□□□□ -0.25
RIPPLY3P57055 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.51□□□□□ -0.25
RIPPLY3P57055 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms