Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.5■□□□□ 0.07
NR1H2P55055 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.5■□□□□ 0.07
NR1H2P55055 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.5■□□□□ 0.07
NR1H2P55055 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.5■□□□□ 0.07
NR1H2P55055 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.49■□□□□ 0.07
NR1H2P55055 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H2P55055 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
NR1H2P55055 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H2P55055 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NR1H2P55055 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.49■□□□□ 0.07
NR1H2P55055 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NR1H2P55055 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.49■□□□□ 0.07
NR1H2P55055 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 PMS2P1-201ENST00000431037 1228 ntBASIC15.49■□□□□ 0.07
NR1H2P55055 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H2P55055 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H2P55055 FGFR3P6-201ENST00000457012 610 ntBASIC15.49■□□□□ 0.07
NR1H2P55055 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.49■□□□□ 0.07
NR1H2P55055 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NR1H2P55055 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H2P55055 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.49■□□□□ 0.07
NR1H2P55055 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NR1H2P55055 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H2P55055 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.49■□□□□ 0.07
NR1H2P55055 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H2P55055 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
NR1H2P55055 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.49■□□□□ 0.07
NR1H2P55055 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
NR1H2P55055 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
NR1H2P55055 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NR1H2P55055 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NR1H2P55055 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NR1H2P55055 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H2P55055 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H2P55055 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H2P55055 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NR1H2P55055 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 SSR4P1-203ENST00000599569 2260 ntBASIC15.48■□□□□ 0.07
NR1H2P55055 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.48■□□□□ 0.07
NR1H2P55055 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NR1H2P55055 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 AC112504.1-201ENST00000623415 1841 ntBASIC15.48■□□□□ 0.07
NR1H2P55055 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.48■□□□□ 0.07
NR1H2P55055 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 C8orf49-201ENST00000525043 1968 ntBASIC15.48■□□□□ 0.07
NR1H2P55055 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 MYCLP1-201ENST00000372451 1075 ntBASIC15.48■□□□□ 0.07
NR1H2P55055 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.48■□□□□ 0.07
NR1H2P55055 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NR1H2P55055 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
NR1H2P55055 ABCD1P5-201ENST00000445663 754 ntBASIC15.48■□□□□ 0.07
NR1H2P55055 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NR1H2P55055 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.48■□□□□ 0.07
NR1H2P55055 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.48■□□□□ 0.07
NR1H2P55055 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.48■□□□□ 0.07
NR1H2P55055 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NR1H2P55055 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.48■□□□□ 0.07
NR1H2P55055 AC117500.6-201ENST00000624871 588 ntBASIC15.48■□□□□ 0.07
NR1H2P55055 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.48■□□□□ 0.07
NR1H2P55055 AF228730.7-201ENST00000641842 219 ntBASIC15.48■□□□□ 0.07
NR1H2P55055 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms