Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.8■□□□□ 0.44
USP8P40818 AL031055.1-201ENST00000606362 631 ntBASIC17.8■□□□□ 0.44
USP8P40818 AC064836.3-201ENST00000607928 673 ntBASIC17.8■□□□□ 0.44
USP8P40818 AC120114.3-201ENST00000611923 658 ntBASIC17.8■□□□□ 0.44
USP8P40818 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP8P40818 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP8P40818 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.8■□□□□ 0.44
USP8P40818 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
USP8P40818 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
USP8P40818 LINC02228-204ENST00000642115 2962 ntBASIC17.8■□□□□ 0.44
USP8P40818 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP8P40818 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP8P40818 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.8■□□□□ 0.44
USP8P40818 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
USP8P40818 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
USP8P40818 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP8P40818 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.8■□□□□ 0.44
USP8P40818 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP8P40818 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.8■□□□□ 0.44
USP8P40818 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.8■□□□□ 0.44
USP8P40818 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP8P40818 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP8P40818 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP8P40818 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
USP8P40818 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.79■□□□□ 0.44
USP8P40818 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
USP8P40818 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 AL513523.2-202ENST00000427283 2040 ntBASIC17.79■□□□□ 0.44
USP8P40818 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.79■□□□□ 0.44
USP8P40818 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
USP8P40818 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.79■□□□□ 0.44
USP8P40818 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
USP8P40818 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.79■□□□□ 0.44
USP8P40818 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.79■□□□□ 0.44
USP8P40818 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.79■□□□□ 0.44
USP8P40818 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
USP8P40818 RNU1-129P-201ENST00000384064 167 ntBASIC17.79■□□□□ 0.44
USP8P40818 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
USP8P40818 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.79■□□□□ 0.44
USP8P40818 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.79■□□□□ 0.44
USP8P40818 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.79■□□□□ 0.44
USP8P40818 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
USP8P40818 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.79■□□□□ 0.44
USP8P40818 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.79■□□□□ 0.44
USP8P40818 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.79■□□□□ 0.44
USP8P40818 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.79■□□□□ 0.44
USP8P40818 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.79■□□□□ 0.44
USP8P40818 AC145285.3-201ENST00000564603 959 ntBASIC17.79■□□□□ 0.44
USP8P40818 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
USP8P40818 U1.21-201ENST00000580816 167 ntBASIC17.79■□□□□ 0.44
USP8P40818 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.79■□□□□ 0.44
USP8P40818 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.79■□□□□ 0.44
USP8P40818 AC023141.13-201ENST00000604991 943 ntBASIC17.79■□□□□ 0.44
USP8P40818 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.79■□□□□ 0.44
USP8P40818 AC007064.4-201ENST00000637740 555 ntBASIC17.79■□□□□ 0.44
USP8P40818 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
USP8P40818 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.79■□□□□ 0.44
USP8P40818 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
USP8P40818 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.79■□□□□ 0.44
USP8P40818 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.79■□□□□ 0.44
USP8P40818 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP8P40818 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.78■□□□□ 0.44
USP8P40818 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
USP8P40818 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.78■□□□□ 0.44
USP8P40818 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
USP8P40818 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 BCAR1-209ENST00000546196 1340 ntBASIC17.78■□□□□ 0.44
USP8P40818 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.78■□□□□ 0.44
USP8P40818 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
USP8P40818 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
USP8P40818 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.78■□□□□ 0.44
USP8P40818 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.78■□□□□ 0.44
USP8P40818 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.78■□□□□ 0.44
USP8P40818 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.78■□□□□ 0.44
USP8P40818 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.78■□□□□ 0.44
USP8P40818 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms