Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HLA-FP30511 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HLA-FP30511 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-FP30511 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-FP30511 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
HLA-FP30511 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
HLA-FP30511 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-FP30511 PCDHA14-201ENST00000506751 2298 ntBASIC16.42■□□□□ 0.22
HLA-FP30511 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-FP30511 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-FP30511 AC007541.1-201ENST00000570282 1469 ntBASIC16.42■□□□□ 0.22
HLA-FP30511 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-FP30511 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-FP30511 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-FP30511 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-FP30511 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
HLA-FP30511 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HLA-FP30511 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-FP30511 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HLA-FP30511 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-FP30511 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HLA-FP30511 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-FP30511 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-FP30511 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-FP30511 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
HLA-FP30511 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-FP30511 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-FP30511 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-FP30511 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-FP30511 AC243562.2-201ENST00000561247 970 ntBASIC16.41■□□□□ 0.22
HLA-FP30511 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-FP30511 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-FP30511 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.41■□□□□ 0.22
HLA-FP30511 AC004461.2-201ENST00000629517 803 ntBASIC16.41■□□□□ 0.22
HLA-FP30511 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-FP30511 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-FP30511 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HLA-FP30511 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-FP30511 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
HLA-FP30511 AC099398.1-201ENST00000567919 2776 ntBASIC16.41■□□□□ 0.22
HLA-FP30511 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HLA-FP30511 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-FP30511 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-FP30511 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-FP30511 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-FP30511 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HLA-FP30511 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-FP30511 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HLA-FP30511 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-FP30511 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-FP30511 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-FP30511 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
HLA-FP30511 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HLA-FP30511 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-FP30511 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-FP30511 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-FP30511 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-FP30511 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-FP30511 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-FP30511 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-FP30511 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-FP30511 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-FP30511 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-FP30511 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-FP30511 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-FP30511 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-FP30511 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
HLA-FP30511 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-FP30511 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-FP30511 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-FP30511 DOC2GP-202ENST00000514950 1163 ntBASIC16.4■□□□□ 0.22
HLA-FP30511 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-FP30511 API5-211ENST00000534695 560 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-FP30511 AC005225.4-201ENST00000557330 545 ntBASIC16.4■□□□□ 0.22
HLA-FP30511 AC025048.3-201ENST00000590609 569 ntBASIC16.4■□□□□ 0.22
HLA-FP30511 AC012645.4-201ENST00000610691 1061 ntBASIC16.4■□□□□ 0.22
HLA-FP30511 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.4■□□□□ 0.22
HLA-FP30511 AC005702.4-201ENST00000618393 416 ntBASIC16.4■□□□□ 0.22
HLA-FP30511 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-FP30511 AC025048.6-201ENST00000634326 1161 ntBASIC16.4■□□□□ 0.22
HLA-FP30511 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HLA-FP30511 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-FP30511 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-FP30511 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-FP30511 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-FP30511 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HLA-FP30511 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HLA-FP30511 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-FP30511 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
HLA-FP30511 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HLA-FP30511 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
HLA-FP30511 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
HLA-FP30511 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HLA-FP30511 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-FP30511 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-FP30511 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
HLA-FP30511 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
HLA-FP30511 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.39■□□□□ 0.21
HLA-FP30511 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.39■□□□□ 0.21
HLA-FP30511 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms