Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP2B1P20020 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2B1P20020 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP2B1P20020 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP2B1P20020 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
ATP2B1P20020 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2B1P20020 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2B1P20020 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2B1P20020 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2B1P20020 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ATP2B1P20020 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2B1P20020 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2B1P20020 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATP2B1P20020 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2B1P20020 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2B1P20020 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2B1P20020 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2B1P20020 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2B1P20020 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2B1P20020 WASH6P-202ENST00000359512 1437 ntBASIC18.77■□□□□ 0.6
ATP2B1P20020 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.77■□□□□ 0.6
ATP2B1P20020 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2B1P20020 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.77■□□□□ 0.6
ATP2B1P20020 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2B1P20020 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ATP2B1P20020 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP2B1P20020 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2B1P20020 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.77■□□□□ 0.6
ATP2B1P20020 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.77■□□□□ 0.6
ATP2B1P20020 AL161645.1-201ENST00000622716 1255 ntBASIC18.77■□□□□ 0.6
ATP2B1P20020 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
ATP2B1P20020 AL513523.2-202ENST00000427283 2040 ntBASIC18.77■□□□□ 0.6
ATP2B1P20020 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ATP2B1P20020 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ATP2B1P20020 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.59
ATP2B1P20020 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATP2B1P20020 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.77■□□□□ 0.59
ATP2B1P20020 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATP2B1P20020 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATP2B1P20020 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATP2B1P20020 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ATP2B1P20020 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ATP2B1P20020 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
ATP2B1P20020 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATP2B1P20020 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
ATP2B1P20020 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
ATP2B1P20020 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP2B1P20020 TSPY26P-202ENST00000565928 3884 ntBASIC18.76■□□□□ 0.59
ATP2B1P20020 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
ATP2B1P20020 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP2B1P20020 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP2B1P20020 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.76■□□□□ 0.59
ATP2B1P20020 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.76■□□□□ 0.59
ATP2B1P20020 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.76■□□□□ 0.59
ATP2B1P20020 AL671277.1-201ENST00000429656 993 ntBASIC18.76■□□□□ 0.59
ATP2B1P20020 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ATP2B1P20020 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 AL138918.1-201ENST00000568306 659 ntBASIC18.76■□□□□ 0.59
ATP2B1P20020 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP2B1P20020 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP2B1P20020 AC092902.6-201ENST00000641783 218 ntBASIC18.76■□□□□ 0.59
ATP2B1P20020 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 AC010491.1-201ENST00000563101 2797 ntBASIC18.76■□□□□ 0.59
ATP2B1P20020 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP2B1P20020 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
ATP2B1P20020 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP2B1P20020 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP2B1P20020 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP2B1P20020 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2B1P20020 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.75■□□□□ 0.59
ATP2B1P20020 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2B1P20020 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2B1P20020 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2B1P20020 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
ATP2B1P20020 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2B1P20020 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2B1P20020 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2B1P20020 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2B1P20020 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.75■□□□□ 0.59
ATP2B1P20020 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2B1P20020 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2B1P20020 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2B1P20020 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms