Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC069120.2-201ENST00000524091 540 ntBASIC19.08■□□□□ 0.64
TOP1P11387 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.08■□□□□ 0.64
TOP1P11387 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.08■□□□□ 0.64
TOP1P11387 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TOP1P11387 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
TOP1P11387 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.08■□□□□ 0.64
TOP1P11387 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.08■□□□□ 0.64
TOP1P11387 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TOP1P11387 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TOP1P11387 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.08■□□□□ 0.64
TOP1P11387 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.08■□□□□ 0.64
TOP1P11387 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.08■□□□□ 0.64
TOP1P11387 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.07■□□□□ 0.64
TOP1P11387 FO538757.1-201ENST00000623083 1397 ntBASIC19.07■□□□□ 0.64
TOP1P11387 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TOP1P11387 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.07■□□□□ 0.64
TOP1P11387 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.07■□□□□ 0.64
TOP1P11387 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.07■□□□□ 0.64
TOP1P11387 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TOP1P11387 TREML5P-201ENST00000421694 576 ntBASIC19.07■□□□□ 0.64
TOP1P11387 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.07■□□□□ 0.64
TOP1P11387 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.07■□□□□ 0.64
TOP1P11387 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.07■□□□□ 0.64
TOP1P11387 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.07■□□□□ 0.64
TOP1P11387 AL158211.3-201ENST00000607385 239 ntBASIC19.07■□□□□ 0.64
TOP1P11387 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.07■□□□□ 0.64
TOP1P11387 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.07■□□□□ 0.64
TOP1P11387 AL162727.3-201ENST00000635661 2787 ntBASIC19.07■□□□□ 0.64
TOP1P11387 AC006449.5-201ENST00000610658 2098 ntBASIC19.07■□□□□ 0.64
TOP1P11387 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP1P11387 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
TOP1P11387 AL035456.1-201ENST00000456064 1369 ntBASIC19.06■□□□□ 0.64
TOP1P11387 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP1P11387 ME2P1-201ENST00000426028 1970 ntBASIC19.06■□□□□ 0.64
TOP1P11387 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TOP1P11387 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.06■□□□□ 0.64
TOP1P11387 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP1P11387 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP1P11387 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
TOP1P11387 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.06■□□□□ 0.64
TOP1P11387 ALOX12P2-203ENST00000570921 1945 ntBASIC19.06■□□□□ 0.64
TOP1P11387 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
TOP1P11387 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP1P11387 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP1P11387 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP1P11387 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.06■□□□□ 0.64
TOP1P11387 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.06■□□□□ 0.64
TOP1P11387 BANF1P1-201ENST00000553684 263 ntBASIC19.06■□□□□ 0.64
TOP1P11387 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.06■□□□□ 0.64
TOP1P11387 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.06■□□□□ 0.64
TOP1P11387 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.06■□□□□ 0.64
TOP1P11387 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP1P11387 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.06■□□□□ 0.64
TOP1P11387 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.06■□□□□ 0.64
TOP1P11387 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP1P11387 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TOP1P11387 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TOP1P11387 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TOP1P11387 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP1P11387 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP1P11387 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.06■□□□□ 0.64
TOP1P11387 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP1P11387 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.06■□□□□ 0.64
TOP1P11387 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
TOP1P11387 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP1P11387 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TOP1P11387 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.05■□□□□ 0.64
TOP1P11387 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms